Gene detail

Gene detail information of Glyur002605s00039942.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G21270.1	7.00E-158	wall-associated kinase 2
NR	XP_006595272.1	0	PREDICTED: uncharacterized protein LOC100784078 [Glycine max]
COG	YP_001958461.1	6.00E-26	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|Q9LMP1\|WAK2_ARATH	0	Wall-associated receptor kinase 2 (Precursor)
trEMBL	tr\|K7LY32\|K7LY32_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA13G09430.2}

Sequence

Transcript Sequence

>Glyur002605s00039942.1
AAATTAAGGCATCGGTAACTCAAAGCAAGCAATCCATTGTCTCTACTCTCTTCTCTTCCAAATTAAGGCCTATTTTTCTAGTGTTTTTGTGATTGATCCAATTGAAGACAGACAATATGAAAGTGAAGGCGGTGCGCGCGCAAGTGTGGCGGGTGTTGGTGTTTGCATTAACCGGCCTGCAGGTAGGAGCAGTTGCAGCTGATCAAACCCCTTCTCCAGCGGCAGCACCAGCACCAGCACCAACACTGACACCAGAACAATTAGCCCTGCCTGGCTGCAAGTACACTTGTGGAGATGTCCAAATTCCATACCCATTTGGCATAGGCAAGTCATCTACACCTGGTGATAATAACAAACCCTGTTACTTGGAGGACAGATTTAATCTCACTTGCGAAGACTCCAAATTATACGTGGGTAGCATACAAATCTTACACATAGACATCCTCCAAGGTCAAATGGACGTGTCGTTTTACGTCTCATCGTCTTGCGATGCTGAAGGCGACGCCTCGCTCACGTTGGGCTGGTTAAGCATTTCAAACAAGGAAAACAAGTTCATCACTGTTGGCTGCAACAGCTACGGTTATCTCCAAAGCGTCCATAACGAGAACTCATACACAACTGGGTGCGTGACAAGGTGTTCTGGGCCTTCTGGCCTTATGCCTGGAGTGATCGACGATATTAATGGAACGTGTTCGGGTATAGGGTGTTGCCAGGTGGACATTCCTCCTAGAATGAGGAATATCACTATTGAAGCTTATACCTTCAATTCGTCGGATTATTCTTTTGGAGCCTGCACCTATTCCTTCGTGGTCAAGAATCATAACTATGCTTTTTCTCCCATTCATATAGAACAAGGTTTACCTTCCAACGAAAGCCGCATGGTTCTTGATTGGACCGTAGGTGACCAGCGCTGTGGTGTGGCTCCCCAGAGTGGAGTCGACTATGCGTGCAGGAACAATAGCCATTGCATTGATGACACAGACATAGATATTGGTTACCGATGCCGATGCAATCGAGGTTTTGAAGAAAACCCGTACCATCCCGATGGCTGCTTAGACATAGATGAATGTCAGATAGGAACTCATATATGCATAAGCAATAATTGTCACAACACCCTTGGGAATTACACATGTTTATGCCCTAAGGGGCAATCTGGAGATGGAACAAAGGATGGAACTGGGTGCTACCGACATGAGGTACGCATGAAGATTGTCATCGGGGTTGGAACAGGAGTTATTGCTCTATTTGTGGGGATTTCATCGCTGTACTTAATATATCAGAAAAGGAAACTCATGGAACTGAAAGAGAAATTCTTCAAGCAGAATGGTGGTTACATTTTGCTACAACGACTCTCTAGAAGAGAAGACTCCTCCCAAATTGCTCAAATTTTCGCAGAGGAAGAACTAAATAAGGCCACCGACAACTTTGACGAGAGCTTCATCATTGGCAAAGGTGGTTTTGGTACAGTTTTCAAAGGGTTCCTAGCAAATAAAAGAATCGTTGCTATCAAGAAGTCCAAAATAATAGATGCCAGCCAAAACGAGCAATTCATCAATGAGGTGATTGTTCTCTCCCAGATAAACCATAAGAATGTGGTCAAACTCTTGGGGTGCTGTTTGGAGACAGAAGTTCCTCTATTGGTTTATGAATTTGTCAGCAATGGTACCCTTTATGACTTTTTACACAAAGAAGGTAAGGTGAACATTAATCATGCAACATGGAAAACTCGGCTAAGGATAGCAGCAGAAGTAGCTGGAGCTCTGTCATATCTGCATTCATCTGCCTCCATACCCATTATCCATAGAGATGTGAAGAGTGCCAACATTCTCTTGGATGACACTTACACTGCAAAAGTGTCTGATTTTGGAGCTTCAAGACTGGTTCCCCTTGATCAAGTTGAAATAGCCACAGTGTTGCAAGGAACTCTTGGTTATTTAGACCCAGAGTATATGCAAACACATCAACTAACTGAGAAAAGTGATGTTTATAGCTTTGGGGTAGTGCTTATAGAGCTCTTAACAGGCGAGAAACCTATTTCTTTTGATAGGCCAGAAGACAAAAGAAGCCTTGCTATGCATTTTCTATCTTGCTTGAAAAATGACCGAATGTTTGAAGTTCTTCAAGATGGCATATTGAGTGAAGAAAATAAGCAGGAGATCAAGGAGGTTGCTATTCTTGCAGCAAAGTGCTTGAGACTTAAAGGGGAGGAAAGGCCTAGCATGAAGGAAGTGACTATGGAGTTGGAGGGAATGAGGTCAATGGAGAAGCATTCTTGGATTAATACAGATGTAGAGGAGACTCGTTACTTGCTTCATGAAACATCATCATCTAGCATTTATGAAACTGGTGATAGTAGCAAACATGGATCTACTGGGTATGACAGCTTGAAAGATGGTGTACAACTGATTGTCTTGGATGATGGAAGATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold02605	21639	26046	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.17.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005509 calcium ion binding

GO:0005515 protein binding

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

GO:0030247 polysaccharide binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002605s00039942.1	PF13947.1	GUB_WAK_bind	52	152	4.70E-18
Glyur002605s00039942.1	PF07645.10	EGF_CA	314	349	3.50E-07
Glyur002605s00039942.1	PF07714.12	Pkinase_Tyr	443	709	9.90E-52

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.034
SRR1783600	control	0.016
SRR1783602	moderate drought stress	0.005
SRR1811619	moderate drought stress	0.008

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.060
DRR006524	Root Summer glycyrrhizin low producing strain	0.015
DRR006525	Leaf Summer glycyrrhizin high producing strain	8.607
DRR006526	Leaf Summer glycyrrhizin high producing strain	8.599

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.000
SRR2868004	Drought Stress (root)	0.060
SRR2967015	Control (root)	0.116

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.300
SRR9715740	Leaf	0.190
SRR9715741	Leaf	0.468
SRR9715739	Root	0.000
SRR9715742	Root	0.174
SRR9715743	Root	0.009

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.058
SRR8749028	MeJA induced 9h	0.069
SRR8749029	MeJA induced 9h	0.038
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.035

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.023
SRR8400027	Control - Root	0.136