Gene detail information of Glyur002602s00031754 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003601184.1 | 1.96E-26 | Phloem specific protein [Medicago truncatula] |
| trEMBL | tr|G7J4R7|G7J4R7_MEDTR | 7.00E-27 | Phloem specific protein {ECO:0000313|EMBL:AES71435.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02602 | 29376 | 29702 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.755 |
| SRR1783600 | control | 0.623 |
| SRR1783602 | moderate drought stress | 4.573 |
| SRR1811619 | moderate drought stress | 4.501 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.455 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.103 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.940 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.365 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 104.947 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 90.305 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.366 |
| SRR2868004 | Drought Stress (root) | 0.260 |
| SRR2967015 | Control (root) | 0.408 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 32.701 |
| SRR9715740 | Leaf | 57.865 |
| SRR9715741 | Leaf | 45.811 |
| SRR9715739 | Root | 0.491 |
| SRR9715742 | Root | 1.640 |
| SRR9715743 | Root | 1.404 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.790 |
| SRR8749028 | MeJA induced 9h | 0.585 |
| SRR8749029 | MeJA induced 9h | 0.896 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.291 |
| SRR8749032 | Uninduced | 0.670 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.051 |
| SRR8400027 | Control - Root | 1.989 |