Gene detail information of Glyur002595s00035351 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G01750.1 | 3.00E-146 | Ankyrin repeat family protein |
| NR | XP_003537546.1 | 0 | PREDICTED: uncharacterized protein LOC100796359 [Glycine max] |
| COG | YP_001958455.1 | 1.00E-13 | hypothetical protein Aasi_1435 [Candidatus Amoebophilus asiaticus 5a2] |
| Swissprot | tr|Q6AWW5|Y5262_ARATH | 8.00E-14 | Ankyrin repeat-containing protein At5g02620 |
| trEMBL | tr|I1LNB6|I1LNB6_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G37350.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02595 | 11786 | 14565 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002595s00035351.1 | PF12796.2 | Ank_2 | 191 | 276 | 4.00E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.920 |
| SRR1783600 | control | 13.513 |
| SRR1783602 | moderate drought stress | 12.687 |
| SRR1811619 | moderate drought stress | 12.835 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.172 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.048 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.845 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.826 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.342 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.303 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.631 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.603 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.770 |
| SRR2868004 | Drought Stress (root) | 5.202 |
| SRR2967015 | Control (root) | 6.108 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.279 |
| SRR9715740 | Leaf | 0.971 |
| SRR9715741 | Leaf | 1.646 |
| SRR9715739 | Root | 3.298 |
| SRR9715742 | Root | 3.314 |
| SRR9715743 | Root | 3.726 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.054 |
| SRR8749028 | MeJA induced 9h | 0.992 |
| SRR8749029 | MeJA induced 9h | 0.863 |
| SRR8749030 | Uninduced | 0.611 |
| SRR8749031 | Uninduced | 0.692 |
| SRR8749032 | Uninduced | 0.759 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 21.944 |
| SRR8400027 | Control - Root | 18.939 |