Gene detail information of Glyur002589s00034651 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G08570.1 | 1.00E-36 | atypical CYS HIS rich thioredoxin 4 |
| NR | XP_004493141.1 | 6.54E-65 | PREDICTED: thioredoxin-like 1-1, chloroplastic-like [Cicer arietinum] |
| Swissprot | tr|O64654|TRL11_ARATH | 1.00E-44 | Thioredoxin-like 1-1, chloroplastic (Precursor) |
| trEMBL | tr|V7CX14|V7CX14_PHAVU | 6.00E-56 | Uncharacterized protein {ECO:0000313|EMBL:ESW33918.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02589 | 19321 | 23156 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.409 |
| SRR1783600 | control | 3.604 |
| SRR1783602 | moderate drought stress | 5.075 |
| SRR1811619 | moderate drought stress | 4.678 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.470 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.457 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.517 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.974 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.870 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.915 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.788 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.943 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.569 |
| SRR2868004 | Drought Stress (root) | 3.246 |
| SRR2967015 | Control (root) | 6.551 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.414 |
| SRR9715740 | Leaf | 0.062 |
| SRR9715741 | Leaf | 0.086 |
| SRR9715739 | Root | 0.135 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.051 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.211 |
| SRR8749028 | MeJA induced 9h | 0.284 |
| SRR8749029 | MeJA induced 9h | 0.123 |
| SRR8749030 | Uninduced | 0.592 |
| SRR8749031 | Uninduced | 0.054 |
| SRR8749032 | Uninduced | 0.597 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.462 |
| SRR8400027 | Control - Root | 1.279 |