Gene detail

Gene detail information of Glyur002589s00034649

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G33260.1	2.00E-124	Tryptophan/tyrosine permease
NR	XP_003519948.1	0	PREDICTED: uncharacterized protein LOC100785767 [Glycine max]
COG	YP_007167.1	6.00E-24	tyrosine/tryptophan transport protein [Candidatus Protochlamydia amoebophila UWE25]
trEMBL	tr\|K7K6V6\|K7K6V6_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA02G07780.3}

Sequence

Transcript Sequence

>Glyur002589s00034649.1
ATGCAACAACTCCATCTCTCCTTGCCATTCAACCACAAGTATCATCTCACATGTCAAAAATTAAATGGCATAGTACATTTTCNTGGACACAGAACCCATCATCTTCAAACCAGTGTTCTCATCAGTAACCATAAGCCTACTCTATCTCCTTTGTTCACAACCAATGCCTCCAACAACCTTGNTCCAATAAAAAAAATTGCACCCTGTAATGCAATAGCATTCCCTAGTAGCCACCCCTCAGATGGGGATGCCGATGATGATAATGATGATGTTGTTGTTGTTGACAACCCTATCAAGAATGAGGGTTCTGAAGAAGGGAAGAAAGGGGAGAAGAACTTCTGGGGTGCTGTTACTTTGATCATTGGTGCTGCTGTTGGGCCTGGAATGTTGGGCCTGCCATCATTGACCATCAAATCAGGCCCATTCCCTTCAACACTCATCATTCTCCTTGCCTGGCTCTATGTAATCTCCTCNATCATCATTGTTGCTGAGCTTTGCTTTGATGCAATGGAACAAGATGGAATTGAAGAGGTGAGCTTCACAAGCCTAGCAACAAGGACACTAGGAAGTAAATTTGGTGCTTTTGTTGCTTTGGTTTACACCAGCTTGTGTTTCTCCCTTCTTGTTGCATGTGTTGCTGGAATTGGATCCATTTTCTCACCATGGTTCCCAATGTTGAAGAACAACACTTTAATCCTCCATGCCTTGTTCCCTCTTCTTGTTGGTGTTTTGATTGTGTTTTTCCCATTCAACACTATTGATGTTGCAAACAGGCTTTTGTGTTTCCTCATGCTTTTCTCAATAACTGGACTTGTAGCGGTTGGTTTATCTGTTGCAAGAGCTAACATAATAAGCTCTTTTTTTGCTTCAGCCTCATGGGAACTTTCATCAATTCTTCCTATTATACCTGTGGCTGTACTCACATTGGGGTTCCATGTTATAACTCCTTTCATGTGTAAGATTGCTGGGAACACNGTACATGAGGCTAGGAAAGCAATACTAATTGGTGGGGCTGTTCCTTTGGTCATGGTTTTNTCATGGAATTTGATTGTTTTGGGGCTTGTTGGGAGTACTAATAAAGGAACAAACTTTGGTGGTGACCCTATTTCTCTCTTGCTTTCTGTGAACCCTTCTGCTTTGTCTGCAGTTCAAGGCTTTGCTTTCTCTGCTATGGCAACTAGCTTGATTGGTTATGCTGTTAGCTTGCCCAAACAGATCCTTGACACTTTGGAGTTGGTGTTTGGAAAAGGTGCTGCAGCTTCTTCTAGAAATTTGAGTATAGAAGGATCTCATGAAATGAGATCAAATGATGAGGAAACATTTGATGCAGTTAAAGTCTTTGTAACACTATTAGTCCTTGGTTTCTCTGTGCTGATAGCCTCATATTTTAGATCCACTTTTTCAAGAGCTCTTGACTTTGCTGGGGTATATGCAAATTGCTTCCTTTTTGGCATTATTCCTCCTGTCATCCTCAGTTCCAGGAGGAAATGTTACACTTCTATTGCTTTTCATCATCTCAGTCATTTTGGGAATTTGGCATTAGATATTCTTTGCAAAGACTAGGCTTAGAAAGTGGCCAAACAAATGCTAAAACGCAATAAGAGAACAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold02589	13732	15924	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0003333 amino acid transmembrane transport

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002589s00034649.1	PF03222.8	Trp_Tyr_perm	111	501	2.80E-82

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.477
SRR1783600	control	0.534
SRR1783602	moderate drought stress	0.740
SRR1811619	moderate drought stress	0.734

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.994
DRR006520	Root Summer glycyrrhizin high producing strain	1.746
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.067
DRR006523	Root Summer glycyrrhizin low producing strain	0.961
DRR006524	Root Summer glycyrrhizin low producing strain	0.932
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.851
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.860

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	12.689
SRR2868004	Drought Stress (root)	5.800
SRR2967015	Control (root)	5.544

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.022
SRR9715740	Leaf	0.079
SRR9715741	Leaf	0.101
SRR9715739	Root	0.160
SRR9715742	Root	1.690
SRR9715743	Root	0.951

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.752
SRR8749028	MeJA induced 9h	0.418
SRR8749029	MeJA induced 9h	0.193
SRR8749030	Uninduced	0.239
SRR8749031	Uninduced	0.047
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	2.845
SRR8400027	Control - Root	3.145