Gene detail information of Glyur002584s00042059 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G53990.1 | 4.00E-34 | Adenine nucleotide alpha hydrolases-like superfamily protein |
| NR | XP_004492382.1 | 1.33E-47 | PREDICTED: uncharacterized protein C167.05-like [Cicer arietinum] |
| trEMBL | tr|I3SBV4|I3SBV4_LOTJA | 3.00E-47 | Uncharacterized protein {ECO:0000313|EMBL:AFK37746.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02584 | 20589 | 21349 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002584s00042059.1 | PF00582.21 | Usp | 5 | 108 | 4.80E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.080 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.382 |
| SRR1811619 | moderate drought stress | 0.371 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.477 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.045 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 21.813 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 21.589 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.387 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.651 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.247 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.408 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.922 |
| SRR2868004 | Drought Stress (root) | 0.389 |
| SRR2967015 | Control (root) | 0.668 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.155 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.242 |
| SRR9715739 | Root | 0.193 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.479 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.509 |
| SRR8749028 | MeJA induced 9h | 0.380 |
| SRR8749029 | MeJA induced 9h | 0.378 |
| SRR8749030 | Uninduced | 0.107 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.259 |
| SRR8400027 | Control - Root | 1.859 |