Gene detail information of Glyur002570s00042009 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007140474.1 | 2.22E-35 | hypothetical protein PHAVU_008G115600g [Phaseolus vulgaris] |
| trEMBL | tr|V7B6J3|V7B6J3_PHAVU | 8.00E-36 | Uncharacterized protein {ECO:0000313|EMBL:ESW12468.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02570 | 17407 | 17655 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.058 |
| SRR1783600 | control | 6.980 |
| SRR1783602 | moderate drought stress | 7.683 |
| SRR1811619 | moderate drought stress | 7.304 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.541 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.768 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 547.976 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 531.136 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.802 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.470 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.709 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.684 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 79.931 |
| SRR2868004 | Drought Stress (root) | 172.641 |
| SRR2967015 | Control (root) | 254.854 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.458 |
| SRR9715740 | Leaf | 3.271 |
| SRR9715741 | Leaf | 18.234 |
| SRR9715739 | Root | 3.679 |
| SRR9715742 | Root | 41.159 |
| SRR9715743 | Root | 40.685 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 933.784 |
| SRR8749028 | MeJA induced 9h | 2144.217 |
| SRR8749029 | MeJA induced 9h | 1451.439 |
| SRR8749030 | Uninduced | 493.008 |
| SRR8749031 | Uninduced | 1620.193 |
| SRR8749032 | Uninduced | 1291.648 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 76.827 |
| SRR8400027 | Control - Root | 50.919 |