Gene detail information of Glyur002567s00041133 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G60520.1 | 5.00E-08 | |
| NR | KEH22364.1 | 4.70E-39 | zinc ion-binding protein [Medicago truncatula] |
| trEMBL | tr|A0A072TY19|A0A072TY19_MEDTR | 2.00E-39 | Zinc ion-binding protein {ECO:0000313|EMBL:KEH22364.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02567 | 18027 | 18353 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 24.195 |
| SRR1783600 | control | 22.675 |
| SRR1783602 | moderate drought stress | 28.506 |
| SRR1811619 | moderate drought stress | 26.059 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 87.155 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 95.479 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 50.140 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 57.461 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 47.225 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 54.923 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.470 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.163 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.669 |
| SRR2868004 | Drought Stress (root) | 17.064 |
| SRR2967015 | Control (root) | 23.801 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.550 |
| SRR9715740 | Leaf | 31.255 |
| SRR9715741 | Leaf | 39.396 |
| SRR9715739 | Root | 141.747 |
| SRR9715742 | Root | 49.838 |
| SRR9715743 | Root | 60.359 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.854 |
| SRR8749028 | MeJA induced 9h | 32.045 |
| SRR8749029 | MeJA induced 9h | 65.681 |
| SRR8749030 | Uninduced | 16.602 |
| SRR8749031 | Uninduced | 82.982 |
| SRR8749032 | Uninduced | 218.521 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 33.683 |
| SRR8400027 | Control - Root | 28.681 |