Gene detail

Gene detail information of Glyur002557s00031649

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G12500.1	2.00E-120	Nucleotide-sugar transporter family protein
NR	XP_007155615.1	0	hypothetical protein PHAVU_003G216800g [Phaseolus vulgaris]
Swissprot	tr\|Q9LDH3\|PT112_ARATH	0	Probable sugar phosphate/phosphate translocator At1g12500
trEMBL	tr\|V7CBS4\|V7CBS4_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW27609.1}

Sequence

Transcript Sequence

>Glyur002557s00031649.1
ATGAGCAATCCGAGGTTGTTGGCGCTGGACACCAGCGACCAGGTGCTGGACATTCCAGCAACCCCACCGGGTGACCTTCGCAACAACAACCACAACACCTTCGGATCCAACGGCAGCAGCAGCAACCTATTAACGGCGGTAATCATCGCCTCGTGGTACCTCTCCAACATCGGCGTGCTCCTCCTGAACAAGTACCTCCTCAGCTTCTACGGTTACCGGTACCCGATCTTCCTCACAATGCTCCACATGCTATCCTGCGCCGCCTACAGCTACGGCGCAATCAACCTCCTCGAAGTGGTTCCCTTCCAGCAAATCCACTCGAAGAAGCAGTTCATGAAGATCTTCGCGCTCAGCGCAATCTTCTGCTTCTCCGTCGTATGCGGCAACACCTCCCTCCGCTACCTCCCAGTCTCCTTCAACCAAGCAATCGGCGCAACGACGCCGTTCTTCACCGCAATCTTCGCATTCCTCATAACCTGCAAGAAGGAAACCGCGGAGGTCTACCTCGCACTATTACCCGTCGTTTTAGGGATCGTGGTTGCCAGCAACAGCGAGCCGCTGTTCCACCTCTTCGGCTTCTTGGTCTGCGTCGGTTCCACCGCTGGGCGAGCCTTGAAGTCGGTGGTTCAGGGGATTCTGTTGACCTCAGAAGCGGAGAAGCTTCACTCCATGAACCTTCTACTCTACATGGCTCCCATGGCNGCNATGATATTGCTTCCCTTCACTCTCTACATCGAAGGGAATGTTCTGTCGTTCACGATTCAGAAGGCCAGGGGTGACCCCTTTGTTATTTTCTTGCTGCTTGGGAATGCCACCGTAGCTTATTTGGTCAACCTCACTAATTTTCTGGTCACGAAACACACCAGTGCCTTGACGCTCCAGGTTCTGGGGAATGCCAAGGCTGCTGTGGCGGCTGTTGTTTCGGTTCTCATCTTCAGAAACCCTGTAACCGTCATGGGGATCACCGGCTTCGGCATTACCATCATCGGTGTCGTGCTCTACAGTGAGGCAAGGAAGAGATCCAAAGTTACCACTCATTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold02557	24204	25244	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002557s00031649.1	PF03151.11	TPT	192	335	2.10E-33

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	20.985
SRR1783600	control	22.148
SRR1783602	moderate drought stress	13.935
SRR1811619	moderate drought stress	13.848

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	11.409
DRR006520	Root Summer glycyrrhizin high producing strain	11.931
DRR006521	Root Winter glycyrrhizin high producing strain	4.968
DRR006522	Root Winter glycyrrhizin high producing strain	5.228
DRR006523	Root Summer glycyrrhizin low producing strain	8.006
DRR006524	Root Summer glycyrrhizin low producing strain	8.873
DRR006525	Leaf Summer glycyrrhizin high producing strain	29.691
DRR006526	Leaf Summer glycyrrhizin high producing strain	29.830

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	26.069
SRR2868004	Drought Stress (root)	22.431
SRR2967015	Control (root)	22.681

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	28.216
SRR9715740	Leaf	18.360
SRR9715741	Leaf	18.013
SRR9715739	Root	24.564
SRR9715742	Root	20.318
SRR9715743	Root	19.274

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	18.177
SRR8749028	MeJA induced 9h	15.963
SRR8749029	MeJA induced 9h	7.127
SRR8749030	Uninduced	2.701
SRR8749031	Uninduced	0.470
SRR8749032	Uninduced	0.660

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	17.532
SRR8400027	Control - Root	24.614