Gene detail

Gene detail information of Glyur002555s00043101

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G26330.1	1.00E-97	cytochrome P450, family 71, subfamily B, polypeptide 37
NR	XP_003614173.1	0	Cytochrome P450 71B10 [Medicago truncatula]
COG	YP_004303682.1	4.00E-31	cytochrome P450 [Polymorphum gilvum SL003B-26A1]
Swissprot	tr\|P24465\|C71A1_PERAE	8.00E-133	Cytochrome P450 71A1
trEMBL	tr\|G7JZ52\|G7JZ52_MEDTR	0	Cytochrome P450 family 71 protein {ECO:0000313\|EMBL:AES97131.1}

Sequence

Transcript Sequence

>Glyur002555s00043101.1
AAATTGTCCTACAATGGGTCAGACATTTCATTTTCCCCTTATAATGATTGTTGGAGAGAAATCAGAAAAATTTGTGTTGTCCATATATTTAATTCCAAGAGTGTATCATGCTTTTCCTCTATAAGAGAGTTTGAGGTCAAGCAAATGATCAAAAAGATATCTGGGCATGCTGCTTCATCAGTTGTTACAAACTTGAGTGAGTTACTGGTTGCTCTCTCAAGCACCATAATATGTAGGATTGCTTTTGGGAGAAGGTATGAGGAGGAAGGAAGTGAGAGTAGTAAATTCCATGGAATGCTGAATGAGTTTGAGGCCATGTTCACAGCCTTCTTTGTTTCAGATTATATTCCATTCATGGGTTGCATTGATAGACTCACAGGACTACAAGCACGTCTCGAACGAAATTTCAAGGAGTTGGATAAGTTCTACCAAGAGGTAATTGATGAACACATGGATCCAAATAGACAACAACCAGAACAAGACGTTATTGTTGATGTCTTACTCCAATTGAAGAAACAACGTTCCTTTTCAATTGATCTCACTTTTGACCACATCAAAGGGGTCCTCATGGATATGCTTGTAGCTGCAACAGATACCACTTCAGCCACAGCAGTTTGGGCTATGACTGCCCTAATTAAAAATCCAAGAGTAATGAAGAAAGTTCAAGAAGAAATTAGGAACTTGGGAGGTAAAAAAGATTTCTTAGATGGAGNTGATGTTCAAAATTTTCTCTATTTGAAAGCAGTGATAAAAGAGACACTGAGATTGCACCTACCGGCCCCATTGCTTGTGCCAAGAGAATCAAATAAAAAGTGCACTATAGGTGGCTACCATATTCCAGCCAAGACAATCGTTTATGTAAATGCTTGGGCTATTCATAGAGACCCTGATGTTTGGAAAGACCCAGAAGAGTTTTATCCTGAGAGATTCTTAGACAGTTCTGTAGATTTTATGGGACAAGATTTTGAACTAATTCCTTTTGGAGCAGGGCGTAGAATTTGCCCNGGTATTCCTATGGCAATTGCTTCATTGGAACTATTCCTTGCTAATCTTCTCTATTTGTTTGATTGGGAATTGCCACAAGGGTTGGTGAAGGAAGACATTGACACTGAAATGTTGCCTGGACTTACTCAACACAAGAAGAATCCTCTTTGCCTTTTAGCCAAGCCCTATGTAAATGTTAAATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold02555	6534	8226	+

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP71B37

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002555s00043101.1	PF00067.17	p450	4	382	5.50E-89

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.548
SRR1783600	control	2.666
SRR1783602	moderate drought stress	2.754
SRR1811619	moderate drought stress	2.690

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.090
DRR006520	Root Summer glycyrrhizin high producing strain	0.090
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.205
DRR006524	Root Summer glycyrrhizin low producing strain	0.190
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.000
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.000

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	48.305
SRR2868004	Drought Stress (root)	21.781
SRR2967015	Control (root)	15.849

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.000
SRR9715740	Leaf	0.000
SRR9715741	Leaf	0.000
SRR9715739	Root	0.937
SRR9715742	Root	2.334
SRR9715743	Root	2.481

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.169
SRR8749029	MeJA induced 9h	0.153
SRR8749030	Uninduced	0.035
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	15.534
SRR8400027	Control - Root	7.118