Gene detail information of Glyur002551s00039356 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G44860.1 | 1.00E-18 | |
| NR | XP_004502568.1 | 3.84E-127 | PREDICTED: uncharacterized protein LOC101512421 [Cicer arietinum] |
| trEMBL | tr|A0A072V150|A0A072V150_MEDTR | 4.00E-123 | Transmembrane protein, putative {ECO:0000313|EMBL:KEH35396.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02551 | 28582 | 29769 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.064 |
| SRR1783600 | control | 1.971 |
| SRR1783602 | moderate drought stress | 2.433 |
| SRR1811619 | moderate drought stress | 2.546 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.032 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.129 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.042 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.123 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.497 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.379 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.137 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.491 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 49.536 |
| SRR2868004 | Drought Stress (root) | 99.563 |
| SRR2967015 | Control (root) | 98.859 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 46.590 |
| SRR9715740 | Leaf | 50.531 |
| SRR9715741 | Leaf | 61.470 |
| SRR9715739 | Root | 6.638 |
| SRR9715742 | Root | 13.001 |
| SRR9715743 | Root | 11.693 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.152 |
| SRR8749028 | MeJA induced 9h | 45.353 |
| SRR8749029 | MeJA induced 9h | 17.152 |
| SRR8749030 | Uninduced | 40.211 |
| SRR8749031 | Uninduced | 27.669 |
| SRR8749032 | Uninduced | 5.806 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.330 |
| SRR8400027 | Control - Root | 16.418 |