Gene detail information of Glyur002551s00039352 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G02850.1 | 4.00E-16 | plantacyanin |
| NR | NP_001237531.1 | 1.19E-38 | uncharacterized protein LOC100305588 precursor [Glycine max] |
| Swissprot | tr|P00303|BABL_CUCSA | 6.00E-24 | Basic blue protein |
| trEMBL | tr|C6SVS0|C6SVS0_SOYBN | 4.00E-39 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G12680.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02551 | 6316 | 7911 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002551s00039352.1 | PF02298.12 | Cu_bind_like | 63 | 87 | 5.30E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 698.553 |
| SRR1783600 | control | 700.550 |
| SRR1783602 | moderate drought stress | 365.656 |
| SRR1811619 | moderate drought stress | 363.204 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 762.014 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 726.846 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.486 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.519 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 221.703 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 201.238 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.586 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.803 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 113.169 |
| SRR2868004 | Drought Stress (root) | 69.383 |
| SRR2967015 | Control (root) | 88.663 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.148 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.632 |
| SRR9715739 | Root | 140.495 |
| SRR9715742 | Root | 183.615 |
| SRR9715743 | Root | 162.927 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.069 |
| SRR8749028 | MeJA induced 9h | 0.285 |
| SRR8749029 | MeJA induced 9h | 0.036 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 240.885 |
| SRR8400027 | Control - Root | 305.005 |