Gene detail information of Glyur002538s00029060 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G76360.1 | 3.00E-19 | Protein kinase superfamily protein |
| NR | XP_004500872.1 | 7.99E-45 | PREDICTED: probable serine/threonine-protein kinase Cx32, chloroplastic-like isoform X4 [Cicer arietinum] |
| Swissprot | tr|P43293|NAK_ARATH | 2.00E-18 | Probable serine/threonine-protein kinase NAK |
| trEMBL | tr|A0A072V3B8|A0A072V3B8_MEDTR | 1.00E-41 | Serine/Threonine kinase family protein {ECO:0000313|EMBL:KEH36322.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02538 | 36099 | 36512 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.044 |
| SRR1783602 | moderate drought stress | 0.046 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.131 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.130 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.133 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.143 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.112 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.226 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.462 |
| SRR2868004 | Drought Stress (root) | 3.550 |
| SRR2967015 | Control (root) | 1.043 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.353 |
| SRR9715740 | Leaf | 0.018 |
| SRR9715741 | Leaf | 5.053 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.463 |
| SRR8749028 | MeJA induced 9h | 8.736 |
| SRR8749029 | MeJA induced 9h | 4.057 |
| SRR8749030 | Uninduced | 43.700 |
| SRR8749031 | Uninduced | 13.320 |
| SRR8749032 | Uninduced | 14.538 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.051 |
| SRR8400027 | Control - Root | 0.104 |