Gene detail information of Glyur002536s00036355 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G17540.1 | 8.00E-57 | HXXXD-type acyl-transferase family protein |
| NR | XP_003516503.1 | 5.32E-127 | PREDICTED: anthraniloyl-CoA:methanol acyltransferase-like [Glycine max] |
| Swissprot | tr|Q3ZPN4|ACMAT_VITLA | 5.00E-87 | Methanol O-anthraniloyltransferase |
| trEMBL | tr|I1J859|I1J859_SOYBN | 2.00E-127 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G35530.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02536 | 27979 | 38586 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002536s00036355.1 | PF02458.10 | Transferase | 11 | 120 | 2.80E-23 |
| Glyur002536s00036355.1 | PF02458.10 | Transferase | 159 | 287 | 5.80E-17 |
| Glyur002536s00036355.1 | PF02458.10 | Transferase | 400 | 579 | 6.30E-34 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.113 |
| SRR1783600 | control | 0.105 |
| SRR1783602 | moderate drought stress | 0.087 |
| SRR1811619 | moderate drought stress | 0.096 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.373 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.273 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.446 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.709 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.346 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.329 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.456 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.496 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.049 |
| SRR2868004 | Drought Stress (root) | 0.105 |
| SRR2967015 | Control (root) | 0.029 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 16.589 |
| SRR9715740 | Leaf | 6.817 |
| SRR9715741 | Leaf | 12.874 |
| SRR9715739 | Root | 0.035 |
| SRR9715742 | Root | 0.050 |
| SRR9715743 | Root | 0.066 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.382 |
| SRR8749028 | MeJA induced 9h | 0.128 |
| SRR8749029 | MeJA induced 9h | 0.291 |
| SRR8749030 | Uninduced | 0.149 |
| SRR8749031 | Uninduced | 0.202 |
| SRR8749032 | Uninduced | 0.228 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.151 |
| SRR8400027 | Control - Root | 0.137 |