Gene detail information of Glyur002532s00039384 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G01680.1 | 0 | |
| NR | XP_003622294.1 | 0 | hypothetical protein MTR_7g032660 [Medicago truncatula] |
| Swissprot | tr|Q0JIL1|NRX2_ORYSJ | 1.00E-06 | Probable nucleoredoxin 2 |
| trEMBL | tr|Q2HUY0|Q2HUY0_MEDTR | 0 | Sieve element occlusion protein {ECO:0000313|EMBL:AES78512.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02532 | 5124 | 10302 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002532s00039384.1 | PF14576.1 | SEO_N | 25 | 312 | 4.00E-109 |
| Glyur002532s00039384.1 | PF14577.1 | SEO_C | 476 | 713 | 3.00E-93 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.437 |
| SRR1783600 | control | 8.284 |
| SRR1783602 | moderate drought stress | 8.293 |
| SRR1811619 | moderate drought stress | 8.292 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 22.562 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 22.603 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.981 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.660 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.909 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 16.959 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.813 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.869 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.434 |
| SRR2868004 | Drought Stress (root) | 11.070 |
| SRR2967015 | Control (root) | 11.472 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.400 |
| SRR9715740 | Leaf | 0.337 |
| SRR9715741 | Leaf | 0.671 |
| SRR9715739 | Root | 2.138 |
| SRR9715742 | Root | 5.916 |
| SRR9715743 | Root | 5.737 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.812 |
| SRR8749028 | MeJA induced 9h | 4.063 |
| SRR8749029 | MeJA induced 9h | 2.671 |
| SRR8749030 | Uninduced | 1.711 |
| SRR8749031 | Uninduced | 1.015 |
| SRR8749032 | Uninduced | 1.653 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.063 |
| SRR8400027 | Control - Root | 7.459 |