Gene detail information of Glyur002520s00037980 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G37190.1 | 1.00E-22 | COP1-interacting protein 4 |
| NR | XP_006601919.1 | 0 | PREDICTED: dentin sialophosphoprotein-like isoform X2 [Glycine max] |
| trEMBL | tr|K7LS27|K7LS27_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G37570.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02520 | 5037 | 10899 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.205 |
| SRR1783600 | control | 16.365 |
| SRR1783602 | moderate drought stress | 27.516 |
| SRR1811619 | moderate drought stress | 27.206 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.373 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.908 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.524 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.264 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 25.015 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 24.861 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.539 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.471 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.674 |
| SRR2868004 | Drought Stress (root) | 15.639 |
| SRR2967015 | Control (root) | 18.226 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.655 |
| SRR9715740 | Leaf | 5.008 |
| SRR9715741 | Leaf | 2.308 |
| SRR9715739 | Root | 0.844 |
| SRR9715742 | Root | 3.871 |
| SRR9715743 | Root | 4.124 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 23.217 |
| SRR8749028 | MeJA induced 9h | 22.779 |
| SRR8749029 | MeJA induced 9h | 15.680 |
| SRR8749030 | Uninduced | 2.398 |
| SRR8749031 | Uninduced | 1.736 |
| SRR8749032 | Uninduced | 3.256 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.653 |
| SRR8400027 | Control - Root | 20.506 |