Gene detail information of Glyur002517s00037498.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G08080.1 | 5.00E-56 | alpha carbonic anhydrase 7 |
| NR | KHN39018.1 | 2.61E-107 | Bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3 [Glycine soja] |
| COG | NP_241226.1 | 8.00E-26 | carbonic anhydrase [Bacillus halodurans C-125] |
| Swissprot | tr|Q8L817|ATCA7_ARATH | 2.00E-68 | Alpha carbonic anhydrase 7 (Precursor) |
| trEMBL | tr|I1L913|I1L913_SOYBN | 1.00E-107 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G06710.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02517 | 26369 | 31032 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01674 | cah | EC:4.2.1.1 | Nitrogen metabolism | map00910 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002517s00037498.1 | PF00194.16 | Carb_anhydrase | 29 | 136 | 1.60E-16 |
| Glyur002517s00037498.1 | PF00194.16 | Carb_anhydrase | 140 | 184 | 3.00E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 60.302 |
| SRR1783600 | control | 59.461 |
| SRR1783602 | moderate drought stress | 18.204 |
| SRR1811619 | moderate drought stress | 18.871 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.032 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.790 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.730 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.304 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.170 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.347 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 29.033 |
| SRR2868004 | Drought Stress (root) | 20.563 |
| SRR2967015 | Control (root) | 16.451 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.399 |
| SRR9715740 | Leaf | 0.212 |
| SRR9715741 | Leaf | 0.624 |
| SRR9715739 | Root | 8.190 |
| SRR9715742 | Root | 12.483 |
| SRR9715743 | Root | 10.686 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 72.718 |
| SRR8749028 | MeJA induced 9h | 64.860 |
| SRR8749029 | MeJA induced 9h | 93.030 |
| SRR8749030 | Uninduced | 152.771 |
| SRR8749031 | Uninduced | 81.584 |
| SRR8749032 | Uninduced | 89.167 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 53.381 |
| SRR8400027 | Control - Root | 39.899 |