Gene detail information of Glyur002514s00041949 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G44920.1 | 2.00E-52 | |
| NR | AFK48631.1 | 2.07E-109 | unknown [Lotus japonicus] |
| trEMBL | tr|I3T7Y9|I3T7Y9_LOTJA | 8.00E-110 | Uncharacterized protein {ECO:0000313|EMBL:AFK48631.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02514 | 15997 | 19223 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002514s00041949.1 | PF11255.3 | DUF3054 | 113 | 206 | 4.10E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.960 |
| SRR1783600 | control | 10.466 |
| SRR1783602 | moderate drought stress | 6.653 |
| SRR1811619 | moderate drought stress | 7.296 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.560 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.561 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.433 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.626 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.573 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.944 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 65.701 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 66.761 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.719 |
| SRR2868004 | Drought Stress (root) | 17.831 |
| SRR2967015 | Control (root) | 17.278 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 61.518 |
| SRR9715740 | Leaf | 99.347 |
| SRR9715741 | Leaf | 64.112 |
| SRR9715739 | Root | 5.089 |
| SRR9715742 | Root | 10.009 |
| SRR9715743 | Root | 6.924 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.168 |
| SRR8749028 | MeJA induced 9h | 10.570 |
| SRR8749029 | MeJA induced 9h | 8.757 |
| SRR8749030 | Uninduced | 7.752 |
| SRR8749031 | Uninduced | 5.826 |
| SRR8749032 | Uninduced | 5.937 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 24.791 |
| SRR8400027 | Control - Root | 22.284 |