Gene detail information of Glyur002511s00035433 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007146603.1 | 2.67E-39 | hypothetical protein PHAVU_006G054000g [Phaseolus vulgaris] |
| trEMBL | tr|V7BKU5|V7BKU5_PHAVU | 1.00E-39 | Uncharacterized protein {ECO:0000313|EMBL:ESW18597.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02511 | 14482 | 19607 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.073 |
| SRR1783600 | control | 1.957 |
| SRR1783602 | moderate drought stress | 1.520 |
| SRR1811619 | moderate drought stress | 1.406 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.693 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.659 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.917 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.878 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.546 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.612 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.432 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.460 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.422 |
| SRR2868004 | Drought Stress (root) | 2.141 |
| SRR2967015 | Control (root) | 3.040 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.220 |
| SRR9715740 | Leaf | 0.749 |
| SRR9715741 | Leaf | 0.521 |
| SRR9715739 | Root | 0.391 |
| SRR9715742 | Root | 1.272 |
| SRR9715743 | Root | 0.367 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.656 |
| SRR8749028 | MeJA induced 9h | 3.591 |
| SRR8749029 | MeJA induced 9h | 1.316 |
| SRR8749030 | Uninduced | 0.827 |
| SRR8749031 | Uninduced | 0.267 |
| SRR8749032 | Uninduced | 0.130 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.773 |
| SRR8400027 | Control - Root | 2.938 |