Gene detail

Gene detail information of Glyur002507s00039323

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT2G23460.1	extra-large G-protein 1
NR	XP_003530340.1	PREDICTED: extra-large guanine nucleotide-binding protein 1-like [Glycine max]
Swissprot	tr\|O80462\|XLG1_ARATH	Extra-large guanine nucleotide-binding protein 1
trEMBL	tr\|I1KKQ3\|I1KKQ3_SOYBN	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA07G21110.1}

Sequence

Transcript Sequence

>Glyur002507s00039323.1
GAAAAAACAAATGACTTCTCTTCTAAGGAAATTGAAGACTTCTTCTGTGCCTCCTGTTGCTGTGGAAAGCGAAGAAAGCATTAGCAGCAGCTATGACTATTCCTNTGCAGTGGTATACAATGGCCCTCCTCTCACTACTCACTCCATCCCCGAAATCCCTGCTTTCAAAATTGACCAAATCCCAATTGCAGCCATAGCTNCTTATTCTCTCTCTAACGAGAGTCTCTCTGTGCCAGTTATCCAGCCTCTTGGCAAATCNCATCACAACAAGAAACTGTCCACAACAGATTCTTCTCCTGATAATAATGCACTAGTTATTAGAAGAACATCATGTTCAAAAATTGATTTCGATGTGCATGATCATGATGATGTTCCCACAAACTCTGATGATGATACCATAGAGTCAGAGTCAGGTTCAACACGCTCTCTTTCTGGCTCTTCTGAGCACAANAAGGGTACAACATTAACGAAACATGCCAAGCGTCCTTCTGCGGTGACCTTTCGTGATCCCGAGTCAAATTACATGATAGATCATACTACCGACAGTGCCGAGGAGTTTTTCGATTCTCACCAGGTTGTTGCAAGTACTGTCCCTGTGAAGCCACGTGCTGTTAGGCCAGGAGGGAAGAAAGGCTNGTGCTATAAGTGCCTTCAAGGGAACCGTCTAACGGCGAAGGAGGTTTGCATTGTTTGTAGCGCAAAGTATTGCCGGAGCTGTGTGGTGAGGGCAATGGGGTCAATGCCAGAGGGAAGGAAATGTGTTACTTGCATTGGTTACAGAATTGATGAGAGGAAGAGGAGGAAGCTTGGGAGAGGTTCTTCTCGGATACTCAAAAAGTTGCTGTCTGAGTTGATTGTGGCTCAAATCATGGATGATGAAAGGTCTTGTGAAGCGAATCAAATACCACCAGAGCTTATTCGTGTGAACTTGCAACCTCTTGATCGACAACAGCTCATGATGCTACTCAACTGTCGAAACCCGCCGAAACAACTGAATCCAGGATCCTATTGGTATGACAAAGCATCTGGATATTGGGGAAAGGAAGGTGAACCGCCTTGTGAAATTATCAGTCACCAGTTGGATGTTGGGGGTCGCTTGCAGAAAAATGCAAGTAATGGAAACACAAAAATGGCAGGAGTGCCGTGTGAAGGAACTCCCAACTTCTGGGTGAATGCTGATGGATCATACAGGGAAGAGGGGCAGAAGAATGACAGAGGTTGTATATGGGATAAGCGCGGAACAAAGTTTGCTTGTGCAATTCTATCCCTGCCAATTCCTTCAAACCCTGTGACTTTTTCTGATGAAGGTGACACAGTTAACAAAGACAGACTTCATCAGAAAACAACACTTCGCAAATTTCTACTTGTTGGTTCTGTCAATTCTGGANCATGTACTATATTTAAACAGGCCAAACTTCTGTACAATGTTCCTTTCTCTGAAAATGAGCTCCAAAATATCAAGTTGGTGATCCAAAGCAACCTGTTTACCTACCTTGCTATATTGCTGGAGGGGCGCCAAAATTTTGAAGAAGAGAGTTTGCCAGAGAATATGAAGAGGTGGCCTGTTGATGAATCCACTTCACCTGCAGCAGAGAATACTNGTGAAAAATTTGATGCAACACCCTATTCCATTGGCCCACGACTGAAAGCTTTCTCAGATTGGTTACTCAAATGCATGGTGTCAGGTAACTTGGATGCAATATTTCCAGCTGCTACACGTGAATATGGGCCACTGGTGGAGGATTTGTGGAGGGATGAGGCCATTCAGGCGACATACAACAGAAGAAATGAACTAAAAATGCTACCTAGAAGTGCAAACTACTTTCTAGACCGGGCTGTTGAAATTTCCCAGATAGATTATCAACCCTCTGATATGGACATCTTGTATGCTGAGGGGATATCATTATCAAACAGCCTCACTTCAATGGAATTTTCATTTCCCAAGACAAGCAGTGAGGAGACATTGCATCCTGAGTTTCAACATGATTCTTCTCTCAGATACCAACTGATCCGATTACATCCTAAAAGCCTCGGAGAAAACTGCAAGTGGTTGGAGATGTTTGAAGACACCGACGTTGTTTTGTTCTCTGTTGCATTAACTGACTATGATGAGTACACTGTAGACAGCAAAGGAGTTTCCACCAACAAAATGTTGGTAGCCAAGCACCTCTTTGAAAATATCGTTTCTCATCCAACCTTCCATGACAAGAAATTCCTTTTAATTCTGACCAAATTCGATTTGCTTGAGGAAAAGATTGAACTGGTTCCTCTAACAAGATGTGAATGGTTCTGTGACTTCAAGCCAGTTATCAGTCACAATCACAAGAGAGGTGGTAACAATGGAAGTAGCCCCCCATTAGCTCAAAGTGCTTTTCAATATATTGCTGTCAAGTTCAAGAGATTGTTCCATTCTCTTACTAGTGGTCGAATTCTGTTTGTTTCATTAGTTACTGGGTTGGAACCTGATACTATTGATGAAGCTCTCAGATATGGTAGGGAGGTTATGGAGTGGGAAAAATGGGATCCCTCTATTGTAACTGATAAGTCTGAGATTACTTCAACAAGCATTGAGGATGATAGTTACTCATAAAAGCTTCCTCCAAGATATCCGATATAATAGAACCATAACAGTTTATCTGTAAAAAGGCATAGAATATTAGTGGGCACAAATCAGTATGGGGTTCATAAAATTTTGACTTTAGGATCATTAGGTTGGACCCTAAGTATT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold02507	30133	36657	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0007165 signal transduction

GO:0007186 G-protein coupled receptor signaling pathway

molecular_function

GO:0003924 GTPase activity

GO:0004871 signal transducer activity

GO:0019001 guanyl nucleotide binding

GO:0031683 G-protein beta/gamma-subunit complex binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002507s00039323.1	PF00503.15	G-alpha	432	830	1.80E-61

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.063
SRR1783600	control	0.063
SRR1783602	moderate drought stress	0.034
SRR1811619	moderate drought stress	0.028

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.411
DRR006520	Root Summer glycyrrhizin high producing strain	0.427
DRR006521	Root Winter glycyrrhizin high producing strain	0.040
DRR006522	Root Winter glycyrrhizin high producing strain	0.039
DRR006523	Root Summer glycyrrhizin low producing strain	0.402
DRR006524	Root Summer glycyrrhizin low producing strain	0.405
DRR006525	Leaf Summer glycyrrhizin high producing strain	4.712
DRR006526	Leaf Summer glycyrrhizin high producing strain	4.778

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	3.080
SRR2868004	Drought Stress (root)	12.766
SRR2967015	Control (root)	6.359

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	51.008
SRR9715740	Leaf	12.806
SRR9715741	Leaf	64.199
SRR9715739	Root	1.185
SRR9715742	Root	6.963
SRR9715743	Root	5.798

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	2.993
SRR8749028	MeJA induced 9h	4.563
SRR8749029	MeJA induced 9h	1.663
SRR8749030	Uninduced	28.048
SRR8749031	Uninduced	2.431
SRR8749032	Uninduced	0.697

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	1.969
SRR8400027	Control - Root	2.704