Gene detail information of Glyur002501s00037658 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G48830.1 | 1.00E-103 | |
| NR | XP_004492319.1 | 0 | PREDICTED: uncharacterized protein LOC101495517 isoform X1 [Cicer arietinum] |
| trEMBL | tr|K7MSW6|K7MSW6_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G37740.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02501 | 14576 | 22278 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002501s00037658.1 | PF12452.3 | DUF3685 | 347 | 432 | 6.20E-08 |
| Glyur002501s00037658.1 | PF12452.3 | DUF3685 | 465 | 536 | 1.20E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.709 |
| SRR1783600 | control | 2.649 |
| SRR1783602 | moderate drought stress | 2.497 |
| SRR1811619 | moderate drought stress | 2.611 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.666 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.419 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.929 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.500 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.791 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.994 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 19.830 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 19.738 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.243 |
| SRR2868004 | Drought Stress (root) | 7.116 |
| SRR2967015 | Control (root) | 7.038 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.254 |
| SRR9715740 | Leaf | 6.867 |
| SRR9715741 | Leaf | 6.846 |
| SRR9715739 | Root | 1.235 |
| SRR9715742 | Root | 2.268 |
| SRR9715743 | Root | 2.200 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.005 |
| SRR8749028 | MeJA induced 9h | 2.338 |
| SRR8749029 | MeJA induced 9h | 1.794 |
| SRR8749030 | Uninduced | 0.932 |
| SRR8749031 | Uninduced | 0.884 |
| SRR8749032 | Uninduced | 0.950 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.517 |
| SRR8400027 | Control - Root | 6.478 |