Gene detail

Gene detail information of Glyur002499s00037128

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G60160.1	0	Potassium transporter family protein
NR	XP_004509839.1	0	PREDICTED: putative potassium transporter 12-like [Cicer arietinum]
COG	YP_003673841.1	2.00E-112	potassium transporter [Methylotenera versatilis 301]
Swissprot	tr\|O80739\|POT12_ARATH	0	Putative potassium transporter 12
trEMBL	tr\|I1KXH7\|I1KXH7_SOYBN	0	Potassium transporter {ECO:0000256\|RuleBase:RU321113}

Sequence

Transcript Sequence

>Glyur002499s00037128.1
TGATGTCTGCCATAAGTGGTCTACAGGATCAAGTAAATGGATTTGGTACAGGTGAAGTGGTTTTTGTATCAATTGTAGTCCTGGTGGCCTTGTTCAGCATACAACAGTTTGGTACCAGTAAAGTGGGTTTCATGTTTGCCCCTATAATTGCTTTATGGTTCTTTGCTCTGGGTTCTATTGGAATATATAACATACTTAAGTATGATATTACCGTTCTGAGAGCGTTGAACCCAGCTTATATCTATTATTTCTTCAAGAATAATGGCAAAGGTGCATGGTCAGCTCTTGGTGGTTGTGACCTTTCCCTTTGGCCCACTCTTCTATTAGCATTTAAAACTCTTGGTGTGGTATATGGTGACATGGGAACAAGCCCTCTATATGTTTTTGCCGATGTCTTCAGCAAGGTTCCAATTGGATCAGATGATGATGTCTTGGGGGCTTTATCATTAGTAATGTACACAATAGCACTTATTCCATTAGCGAAATACGTTTTTATAGTCCTCAAAGCAAATGATAATGGAGAAGGAGGAACATTNGCACTATACTCGCTGATTTGCAGGTATGCAAATGTGAATTTGCTTCCAAATCGTCAACAAGCTGATGAACANATCTCTAGTTTTAAGCTCAAACTGCCCACCCCAGAACTGGAAAGGGCTTTAAAAGTTAAGGAGACTTTGGAAAGGACAACATTTTTGAAAAACCTATTGTTAGTGTTGGTTCTTNTGGGAACTTCCATGATTATTGGAGATGGTATTCTAACTCCAGCAATATCAGTGATGTCTGCCATAAGTGGTCTACAGGATCAAGTAAATGGATTTGGTACAGGTGAAGTGGTTTTTGTATCAATTGTAGTCCTGGTGGCCTTGTTCAGCATACAACAGTTTGGTACCAGTAAAGTGGGTTTCATGTTTGCCCCTATAATTGCTTTATGGTTCTTTGCTCTGGGTTCTATTGGAATATATAACATACTTAAGTATGATATTACCGTTCTGAGAGCGTTGAACCCAGCTTATATCTATTATTTCTTCAAGAATAATGGCAAAGGTGCATGGTCAGCTCTTGGTGGTTGTGTTTTGTGCATTACAGGTGCAGAAGCAATGTTTGCAGATCTGGGTCATTTTTCTGTACCAGCAATACAGATTGCATTCACTTGTGTGGTATTTCCCTGTCTCCTCCTTGCTTATATGGGCCAAGCTGCTTTTTTGATGGANAACCCCACTTCTTATTCAAGCGTATTCTACAAATCTGTTCCAGAGAGTCTCTTCTGGCCAGTGTTTGTTATAGCCACACTTGCTGCTATGATTGCNAGCCAAGCAATGATATCTGCTACATTTTCATGCGTAAAACAATCCATGGCTTTGGGATGCTTCCCCAGGCTGAAGATAATCCACACCTCAAGAAAGTTTATTGGCCAAATATACATCCCTGTGATTAACTGGTTTCTGATGATCATGTGCATAGTTGTCGTTTCCATCTTCCAAAGCACTACTGATATTGCAAATGCATATGGCATTGCTGAAGTTGGTGTCATGATGGTCAGCACCACCTTGGTGACCCTTGTAATGCTTCTAATTTGGCAGACTAACTTGTTTCTGGCATTTCTTTTCCCACTTGTATTTGGTTCAGTGGAGCTCATTTACATGTCTTCTGTCCTNTCAAAAATCTTTGAGGGTGGCTGGCTTCCACTTGCCTTTGCCACCTTTTTCCTCTCCGTGATGTACACGTGGAACTACGGGAGCGTATTGAAGTANCGAAGCGAAGTCAGGGAAAAGGTTTCGATGGAGTCGATGCTTGATCTTGGCTCTGATCTTGGAACAGTAAGAGTGCCAGGAATAGGATTGCTTTATAATGAGCTTGTCCAGGGCATCCCTTCCATTTTTCTGCAGTTCCTGCTGAGCCTCCCAGCTCTTCACTCTACTATAGTTTTCGTCTGCATCAAATATGTCCCGGTTCCCGTGGTTCCTCAAGAGGAAAGGTTTCTGTTTCGAAGAGTTTGCCCGAAAGACTACCACATGTTCCGCTGTGTNGCCAGGTATGGTTACAAGGATGTGAGGAAGGAAGATCACCATGCATTTGAGCAACTTCTTATTGAAAGTCTTGAGAAGTTCTTGAGAAGGGAAGCTCTAGAAGCTGCCTTGGAGTTGGAGGGAAACTTAACCGACGATACAGACAGTGTCTCAGTGAATACAAGAAATTCTGATACTCTGGCCGGAACTGGGGCAGCAGAGGAGCTTAGGATTCCACTGATGCATGGTCAGAATTTGGAAGAAACAGGAACTTCTACCTCTCAAGAAGCTGCGACTGCATCAGCATTACCATCAAGCTACATGGCGTCAGATGAAGATCCTAGTCTTGAATATGAGCTTTCGGCGNTTAGAGAAGCAATGGATTCGGGATTCACCTATTTGCTTGGACATGGGGATGTGAGGGCAAAGAAGAAGTCTTTTTTCTTCAAGAAATTGGTGATAAATTATTTCTATGCATTTCTCAGAAAGAACTGCAGAGGAGGTACTGCAAACATGAGAGTGCCTCACACCAATATCATTCAAGTGGGGATGACATATATGTTGCAAGCTATGTCTCTAGAGACACGCATCAGAGCCTCCATTTTGTTTTCCTCA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold02499	21317	30419	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0071805 potassium ion transmembrane transport

cellular_component
GO:0016020 membrane

molecular_function
GO:0015079 potassium ion transmembrane transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002499s00037128.1	PF02705.11	K_trans	1	100	2.30E-28
Glyur002499s00037128.1	PF02705.11	K_trans	109	682	1.10E-187

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	6.673
SRR1783600	control	6.686
SRR1783602	moderate drought stress	5.177
SRR1811619	moderate drought stress	5.231

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	5.844
DRR006520	Root Summer glycyrrhizin high producing strain	5.544
DRR006521	Root Winter glycyrrhizin high producing strain	3.861
DRR006522	Root Winter glycyrrhizin high producing strain	3.896
DRR006523	Root Summer glycyrrhizin low producing strain	5.829
DRR006524	Root Summer glycyrrhizin low producing strain	6.313
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.177
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.166

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	12.250
SRR2868004	Drought Stress (root)	12.885
SRR2967015	Control (root)	14.692

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	6.432
SRR9715740	Leaf	9.461
SRR9715741	Leaf	9.551
SRR9715739	Root	4.094
SRR9715742	Root	4.725
SRR9715743	Root	4.504

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	4.947
SRR8749028	MeJA induced 9h	7.018
SRR8749029	MeJA induced 9h	3.475
SRR8749030	Uninduced	2.524
SRR8749031	Uninduced	0.855
SRR8749032	Uninduced	0.949

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	11.557
SRR8400027	Control - Root	10.405