Gene detail information of Glyur002497s00039057 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G24510.1 | 5.00E-77 | HXXXD-type acyl-transferase family protein |
| NR | XP_003519204.1 | 0 | PREDICTED: protein ECERIFERUM 1-like [Glycine max] |
| Swissprot | tr|Q39048|CER2_ARATH | 3.00E-99 | Protein ECERIFERUM 1 |
| trEMBL | tr|I1JH08|I1JH08_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G37870.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02497 | 3776 | 11728 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002497s00039057.1 | PF02458.10 | Transferase | 10 | 437 | 1.20E-33 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.007 |
| SRR1783602 | moderate drought stress | 0.046 |
| SRR1811619 | moderate drought stress | 0.024 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.069 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.067 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.882 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.751 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.122 |
| SRR2868004 | Drought Stress (root) | 0.033 |
| SRR2967015 | Control (root) | 0.273 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.292 |
| SRR9715740 | Leaf | 10.186 |
| SRR9715741 | Leaf | 7.290 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.038 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.110 |
| SRR8749030 | Uninduced | 0.048 |
| SRR8749031 | Uninduced | 0.096 |
| SRR8749032 | Uninduced | 0.107 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.030 |
| SRR8400027 | Control - Root | 0.234 |