Gene detail

Gene detail information of Glyur002495s00037279

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G16540.1	8.00E-147	molybdenum cofactor sulfurase (LOS5) (ABA3)
NR	XP_004506463.1	0	PREDICTED: molybdenum cofactor sulfurase-like [Cicer arietinum]
COG	YP_004774628.1	2.00E-35	MOSC domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprot	tr\|Q9C5X8\|MOCOS_ARATH	3.00E-175	Molybdenum cofactor sulfurase {ECO:0000255\|HAMAP-Rule:MF_03050}
trEMBL	tr\|I1KZR5\|I1KZR5_SOYBN	0	Molybdenum cofactor sulfurase {ECO:0000256\|HAMAP-Rule:MF_03050}

Sequence

Transcript Sequence

>Glyur002495s00037279.1
ACATACATCATCTCTTGCCTTGTATACAAGGGAAATGCTTTTGGCCCTGAGGCATGGCAATGGATCTAGTGTCTGCATCCTCTATGGACGTCATAATTCAATGGAACTGTGTCATGAANTGGGTCCGATAGTTTCATTCAACTTGAAAAGACCAGATGGCTCTTGGTATGGATACCGTGAAGTGGAAAAGCTGGCATCTCTTTCAGGAATTCAGCTAAGGACAGGATGCTTCTGCAATCCAGGTGCATGTGCAAAATACCTTGGCTTGTCTCATATGGATCTCATTTCAAATACTGAGGCTGGTCATGTTTGTTGGGATGATCATGATGTAATTAATGGAAAACCTATTGGAGCTGTAAGAGTATCGTTTGGCTANATGTCAACATTTGAAGATGCCAAGAAATTCATTGATTTTGTAGCAAGATCCTTCATATCACCTCAAAATCACGTTGACCATGGGAATCAATTGAAAGGTGTGAAAGGTTTNCTGGATACTTGTTATTATCTCAAATCAATTACAATATATCCTATAAAATCCTGTGGAGGTTTTAATGCAAGAAGTTGGCCTCTTAGCAACAATGGCCTGAAACATGATCGTGAATGGATTCTCAAAAGCCTAAGTGGTGAATTTCTTACACTGAAAAAGGTTCCTGAAATGGGCTTTATAAGCTCCTTTATTGACCTCAGTCAGGGAATGTTGTTTGTAGAGTCTCCACGTTGCAAAGAAAGATTGCAAATCAAGCTTCAGTTAGATGTATATAATTACAGCAATGAGACCAATGCATGGTTTAGTGAAGCCATTGGTAANCCTTGCACTTTGTTACGATATTCTAGTTCCAATCATGAGTTTGTGCTGGATAAGACCAAAGGTGTAGTCACATGTAGAGATGCAAAGAGTGCAATCAGTTTCGCCAATGAAGCTCAAATTTTACTTGTATCTGAGGAAAGTGTTTCTGACCTAAACAAAAGATTATGTTCAGATGTACAGAAGGGCACATGTGGTGCAGCAATGCAAGTCGATGCAAGTAGATTTCGTCCCAACCTTGTGGTATCTGGAGGCAGACCTTATGATGAAGATGGATGGAGAGACATTAGGATTGGAAATAAGTATTTCAGATCACTAGGGGGATGTAATCGATGCCATGTAATCAACCTTTTACTAAATGATGGACAAGTGCAAAAGTCAAATGAACCTTTGGCAACTCTAGCATCATACAGGAGAGTAAAGGGAAAAATTCTGTTTGGCATACTACTGAAATATGCATCTATTGATGGAGAGCAGCAACAAGGTGATTTCTGGCTTCATGTGGGGCAGGATACTATTCTAGATATGCTATGTAATGTGGTCGTGAATATTGGCAAAATGCATATTGGTCGTAGATTTTTTTATCAATCTCTACCATCAAATGCGAGTGATTTATTGGCTGGAGATCTTTCCTATCTATATTTTTTATCCTTCCTTTGGAGTTTTTTTCTTCTCACTATGATTAAAGATGATCAGTCGAGC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold02495	928	26915	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function

GO:0003824 catalytic activity

GO:0030151 molybdenum ion binding

GO:0030170 pyridoxal phosphate binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002495s00037279.1	PF03476.11	MOSC_N	157	253	3.90E-16
Glyur002495s00037279.1	PF03473.12	MOSC	284	408	1.30E-21

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.297
SRR1783600	control	4.352
SRR1783602	moderate drought stress	3.479
SRR1811619	moderate drought stress	3.524

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	6.103
DRR006520	Root Summer glycyrrhizin high producing strain	5.541
DRR006521	Root Winter glycyrrhizin high producing strain	8.995
DRR006522	Root Winter glycyrrhizin high producing strain	8.530
DRR006523	Root Summer glycyrrhizin low producing strain	5.856
DRR006524	Root Summer glycyrrhizin low producing strain	5.983
DRR006525	Leaf Summer glycyrrhizin high producing strain	3.681
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.574

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	8.496
SRR2868004	Drought Stress (root)	8.419
SRR2967015	Control (root)	9.158

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	6.295
SRR9715740	Leaf	6.035
SRR9715741	Leaf	8.961
SRR9715739	Root	0.671
SRR9715742	Root	4.641
SRR9715743	Root	4.363

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	15.712
SRR8749028	MeJA induced 9h	15.072
SRR8749029	MeJA induced 9h	21.744
SRR8749030	Uninduced	15.657
SRR8749031	Uninduced	36.316
SRR8749032	Uninduced	20.557

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	10.487
SRR8400027	Control - Root	8.850