Gene detail information of Glyur002492s00047271 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003546324.1 | 2.11E-13 | PREDICTED: aspartate and glycine-rich protein [Glycine max] |
| trEMBL | tr|C6SWU9|C6SWU9_SOYBN | 8.00E-14 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G15160.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02492 | 39244 | 39625 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1321.842 |
| SRR1783600 | control | 1335.440 |
| SRR1783602 | moderate drought stress | 827.101 |
| SRR1811619 | moderate drought stress | 816.972 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 168.583 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 166.699 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.144 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.196 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 96.673 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 95.448 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 99.367 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 91.907 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 194.793 |
| SRR2868004 | Drought Stress (root) | 137.424 |
| SRR2967015 | Control (root) | 143.032 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 309.909 |
| SRR9715740 | Leaf | 152.996 |
| SRR9715741 | Leaf | 135.529 |
| SRR9715739 | Root | 179.224 |
| SRR9715742 | Root | 340.949 |
| SRR9715743 | Root | 287.235 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1618.776 |
| SRR8400027 | Control - Root | 1765.624 |