Gene detail

Gene detail information of Glyur002491s00037478

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G27190.1	6.00E-67	NB-ARC domain-containing disease resistance protein
NR	XP_003636525.1	0	Cc-nbs-lrr resistance protein [Medicago truncatula]
COG	YP_001516304.1	1.00E-11	hypothetical protein AM1_1973 [Acaryochloris marina MBIC11017]
Swissprot	tr\|Q9T048\|DRL27_ARATH	1.00E-75	Disease resistance protein At4g27190
trEMBL	tr\|G7ZWS5\|G7ZWS5_MEDTR	0	Disease resistance protein (CC-NBS-LRR class) family protein {ECO:0000313\|EMBL:KEH40896.1}

Sequence

Transcript Sequence

>Glyur002491s00037478.1
ATTTGGTTGGCCTCTGGTTTAAGGCAAAACTATAGAGACTATATCAATCTTCAAGCATTCAAATTGCTCTTGCACTCATTCTTGTTTCGATCCTATCTGGAGTCAAAGGAAAAGGAAGAGGACTGGACAAGAGAAGCAATGGATATTCTCATTTCTGTTGTTGGAAAAGTAGCAGAGTATACAGTTGCACCTATTGGACGACAAGCAGGTTATTTGATATTCTATAGAGGCAATTTCAAGGAGTTAGCGGATCATGTTAAAGAGCTTGAGGGTGCAAGAGAAAGAATGAACCATTCGGTTGAAGAAGAAAGGGGGAATGGTAAAGAAATTGAAAGTGATGTGTTGGACTGGTTGAAGGAGGTGAATGATGTCATTGAAAAGGCAAACCAACTTGAGAATAATCCTCACCGTGTAAAGGCTGGGTGCTCTGGATGGTCATTCCCCAATTTGATTTTACGTCATCAATTCAGCAGGAAAGCCACAAAGATTGCAAAGGAAGTTGTTCAAGTGCAGGGAAAAGGGAAGTTTGATCGGGTTGGTTACCTGCCTGCCCTAGATGGAGTGGGCCTCTCTAACATTTCTGCAACAAGAAGTGACCCAAATGCACGCAACATTGGCGTCTATGGACTCGGCGGTATGGGTAAGACCACTCTGGTTAAGGAAGTTGCTGAAATAGCCAAGCAACACAAATTGTTTGATACAGTGGTTATAGCCCATGTATCCAAAACTCCAGATATNAAAACAATTCAAGGGGAGATTGCGGATATTTTGCGTCTGCGATTTGATGAGGAGACTATTGCTGGTAGAGCACACCGCTTGAGGCAAAGAATCAAAGCAGAGAAGACTATCCTTGTAATTCTTGATGATATATGGACCAGACTTGATTTGGAGAAAGTGGGAATTACATATGGTAATGAACATAATGGCTGCAAATTGCTCATGACTTCCAGAAATGAAGATGTTTTGCTGGAAATGGACGCTCAAAAGGATTTCACTTTTAGGCTTGGCCTTCTGACTGAAGCAGAAACATGGAGCTTGTTTCAATTCATGGCTGGGGATGTGGTTAAAGATAGCAATTTAAGAGATGTAGCAACTCAAGTGGCCCAAAAATGTGCAGGTTTGCCTCTTCGCATAGTGACGGTAGCACGGGCACTGAGAAATAAGAGGGATGTTCAATCTTGGGAAGATGTATTAAGGCAATTACAAAGTATTGATCACGGAGAAATGGACGCGGTAACTTATTCTGCTTTGGAGTTGAGTTACAACTCGTTGGAGAGCNATGAAATGAAGGCACTCTTCTTGCTTTTTGCATTACTGGGAGATGGACCTGTAGAGTACTTATTTAAAGTTGCAATGGGTTTGGGCATATTTAAGCATATAAATAATGTGGATGTTGCAAGAAACAGACTTTACAAGATAATCGAATCATTGAAGGCATCTTGCATGTTGCTTGAAGGTAACATAAGTGGGCAGTTTCAAATGCATGACTTTGTTCGGGATGTAGCTATCTCCATAGCACATAGGGATCAACATGTGTTTGTGAGGAAAATGGGAGATGGGTTGAAGGAATGGCCAACCAAGGATTTTCTAAAACGATGTTCACATATCATCTTAGTCGGGTGTCATATCCACGAACTTCCTCAAAGGTTAGACTGTCCTAACGCTAAGCAGTTCAATTTGAGCAGTGTAAATCGTTCTTTAGACATCCCAGACACTATTTTTGAGGGGATGGGAGGCCTTAGAGTGTTAGATTTAACATGCTTGAACTTGTCTTCATTGCCCACTTCTTTTCAATCCCTAACTTGCCTTCAAACATTGTGTTTGGATCATTGTTCTTTGGAAAATATGGATGCAATAGAAGCTTTGAAAAACTTAGAAATTCTTAGCCTCTGGGGATCTTCGATGATCAAGTTGCCAAGTGGAATAGGCAAATTGACTCAACTAAGAATGCTTGATTTGCATGACTCTGGAATAGAAGTTATTCCACCCAACATCATATCGAGCTTGATTAGATTGGAGGAGTTGTACATGGGCAATACCTCTATTAAGTGGGAAGATGAGAATTCAGCTAAGCAAAATGAAAATGCTAGCCTTGCTGAGCTTCGACATTTGTCCAACTTGACAGCTCTGGAATTACAAATTCCCGAGGCGTGGATTTTGCCAAGGGACTTAAAATTGATGTTTGAGAAGCTGAAACGATATAAGATAGCTATTGGAGATGTATGGGAATGGTCTGACATCAAGGATGGAATCTTGAAAACATTGATGCTCAAACTTGGTACCAACAACATACATCTAGAGCACGGGATTAAAGCATTGATTAAAGGGGTCGAGAATTTGTACTTGGATGAAGTAGATGGCATTCAGAATGTGCTTTATCAACTGAATGGGGAAGGATTTCCATTGTTGAAGCACCTCCACATCCAAAATAATTCGAATATGAAACACATAGTTGACTCTATGGAGAGGAATCAAGTNNGGGTTTCCTTTCNCAACTTGGAAACACTAGTACTCCACAATCTTGAAAACTTGGAGCAGATAATGCGTGGCCCACTTGCAATTAATTCTTTGGGCAAGCTTAGAGTCATCAAAGTGAAAAATTGTGTCCAATTAAAATATCTTCTCTCCTTTCCAATGGTAAAAGGACTTTCTCAACTTTTGGAGATCGAAGTTTGTCAATGCAGTTCCATGAAGGAGATAGTACTCGGAGACAACAATTCAAGTGCGGACAATGACATAACTAATGAAAAAATGGAGTTCAATTCATTGCGTTCTTTGACTTTACAACACTTGCAGACACTTGATAATTTCTTCTCTTATGAGTTGACATCTTCCACAACCGAGCGAAAGTATCAAAGGTCGGAGACTTGCGTTTCTAAATCGTTTTTCAGTATTCAGAACTGTGGTGGGTTGAAGTACTTGTTCTCATCTACCATGGTTGGGAGTTTTATAAACCTCAAACAGCTTGAAATTAGTAAATGTCATTTGATGGATGAGATAATAGCTACAGAAAAGAGATACAATGGTACGATTGCATCGGAAGAGGACATGAAAAACTTGAAGACAATATGGCATTGCCAATTTGACACATTGAAGACGTTGCAAGTCAAAGATTGTGAGAAAGTTGTGGTGATTTTTCCTTCTTCAATGCACAAAACTTATCGTAACCTAGAGATGTTAGAGGTTACAGATTGTGCTTTAGTGGAAGAGATATTCGAATTGACTTCCAGTCAAAAGAACAGTATGGAGAATGCAATGCATTTGAAAGGAATTACTTTAGATGGATTGCCAAAGATGAAAAAGATATGGAGCATGGATCCTCAAGGATTTCTTAGTTTTGCTAATCTAGAAAATGTATATATTAGTCACTGTGGAAGCTTGGAGTATCTATTTCCACTTTATGTGGCCATTTCCTGCTCACGTCTCAGAAAAATTCGTATGAAATTGTGTACGAACATGAAGCAAATTGTGGCATCTCAGAAAGAATCTTTGTGCACAACTCCCACATTTGAGTTTAATCAATTGAATACTTTACTCCTTTGGAACTTACACAAGCTCAAGGGTTTCTATGCAGGAAATCACACTCTTGCTTGTCCATCTTTGAGAAAAATAGATGTGAGAAATTGTGCAAAATTGAATTTATACAGAACTCTATCTACATGCAGCCACAAAAGCTTTCTAGATTGCAAAATGCCAGTTTTCATTGTCGAAGAGGTGATTCCAAACTTGGAGAGGTTGATAATAAACCATAGAGATGCCAACATGATATTGCAAGCCCAGGATTTAGATGTCATCTTCAACAAAATAAAATATTTTGGTTTGTCGCATTTTGAGAATGAAGAGGCTACATTTCCTTATTGGTTTCTCCAAAATGTACGTACTCTTGAAATTATGGTTGTTGAGTGGAGTTCCTTCAAGAATATATTCCATGATGAAAGACTAGTAAATGAGAAAAGTCACACACGACTCAAAAATTTGATACTGGTTGAGTTACCTAAACTTCAACATATATGTCAAGAAGGATCCCCAATTGATCCAGTTCTTGAGTTTCTTGAATACTTAGATGTTGTTGGATGTCCTAGTCTGACAAACTTGCTACCTTCCTCTGTCGCCTTCAGTCACCTAACATATTTGGCGGTAACAAATTGCAATGGGCTGATAAAGTTAATTACATCTCCTACTGCACGGCGTCTAGACAAGCTCACAATAATGAAGGTAAAAGACTGCAACTCACTTGAAGAAATAATTACAGGAAAGGATAATGTTGGCATTGCACTTATTAGTTTGGAAATTTTGATGCTGGAATGTTTGCCAACACTCAACAAATTTTGCTCCAGTAAGTGCTTCTTGAAGTTTCCGTTGTTGAAGGATGTAGTTGTGAGGGAATGTCCTCGCATGAAGATTTTCTCTGAGGGAGACACAAGCACACCAAATCTTAGGAAAGTAAAAATTGCAAAAAATGAGGATGAATGGCATTGGAAGAGGAACCTAAATGATACAATAAAGAACATGTTTGAAGATAAGGTTGCATTTTGTAAATTCAAACATTTGGCCTTGTCCGAATTTCCTGAGCTAAAGGATTTGTGGTATGACCAACATCACCACAATGTAACTCACAATACTAGCAATAAAAATTGTGAGATGATTTTGGATGTCATAAAGATTGATGAAGAAAAAGAAGAGGAAGACATCATATTCGAAAACCTCGAATACTTGAAATTAACTTCTCTATCAATGGTGCAAAGATGTGATTTCTTATCACATGTACTTTTTCCATCAAATATAATGCAAGTGCTATATGGATTGGAAGACCTGAAAGTAAAAGATTGTGATTCATTAGAAGCATTCTGCTATGAGAAGCACACATTCATGTTCCCATCTTTGCTACGTTTTGTTGTTAGAGAATGCCCTCAAATGAAGAATTTCTCATCAGCAATCACAATAGCACCATACTTGTCAGCAATTGAAGTGGAAAACAAAACAATGCGATGGAAAGGTGATCTTAATACAACTATTGAACAATTGTTCAAAGAACAG

Protein Sequence

>Glyur002491s00037478.1
IWLASGLRQNYRDYINLQAFKLLLHSFLFRSYLESKEKEEDWTREAMDILISVVGKVAEYTVAPIGRQAGYLIFYRGNFKELADHVKELEGARERMNHSVEEERGNGKEIESDVLDWLKEVNDVIEKANQLENNPHRVKAGCSGWSFPNLILRHQFSRKATKIAKEVVQVQGKGKFDRVGYLPALDGVGLSNISATRSDPNARNIGVYGLGGMGKTTLVKEVAEIAKQHKLFDTVVIAHVSKTPDXKTIQGEIADILRLRFDEETIAGRAHRLRQRIKAEKTILVILDDIWTRLDLEKVGITYGNEHNGCKLLMTSRNEDVLLEMDAQKDFTFRLGLLTEAETWSLFQFMAGDVVKDSNLRDVATQVAQKCAGLPLRIVTVARALRNKRDVQSWEDVLRQLQSIDHGEMDAVTYSALELSYNSLESXEMKALFLLFALLGDGPVEYLFKVAMGLGIFKHINNVDVARNRLYKIIESLKASCMLLEGNISGQFQMHDFVRDVAISIAHRDQHVFVRKMGDGLKEWPTKDFLKRCSHIILVGCHIHELPQRLDCPNAKQFNLSSVNRSLDIPDTIFEGMGGLRVLDLTCLNLSSLPTSFQSLTCLQTLCLDHCSLENMDAIEALKNLEILSLWGSSMIKLPSGIGKLTQLRMLDLHDSGIEVIPPNIISSLIRLEELYMGNTSIKWEDENSAKQNENASLAELRHLSNLTALELQIPEAWILPRDLKLMFEKLKRYKIAIGDVWEWSDIKDGILKTLMLKLGTNNIHLEHGIKALIKGVENLYLDEVDGIQNVLYQLNGEGFPLLKHLHIQNNSNMKHIVDSMERNQVXVSFXNLETLVLHNLENLEQIMRGPLAINSLGKLRVIKVKNCVQLKYLLSFPMVKGLSQLLEIEVCQCSSMKEIVLGDNNSSADNDITNEKMEFNSLRSLTLQHLQTLDNFFSYELTSSTTERKYQRSETCVSKSFFSIQNCGGLKYLFSSTMVGSFINLKQLEISKCHLMDEIIATEKRYNGTIASEEDMKNLKTIWHCQFDTLKTLQVKDCEKVVVIFPSSMHKTYRNLEMLEVTDCALVEEIFELTSSQKNSMENAMHLKGITLDGLPKMKKIWSMDPQGFLSFANLENVYISHCGSLEYLFPLYVAISCSRLRKIRMKLCTNMKQIVASQKESLCTTPTFEFNQLNTLLLWNLHKLKGFYAGNHTLACPSLRKIDVRNCAKLNLYRTLSTCSHKSFLDCKMPVFIVEEVIPNLERLIINHRDANMILQAQDLDVIFNKIKYFGLSHFENEEATFPYWFLQNVRTLEIMVVEWSSFKNIFHDERLVNEKSHTRLKNLILVELPKLQHICQEGSPIDPVLEFLEYLDVVGCPSLTNLLPSSVAFSHLTYLAVTNCNGLIKLITSPTARRLDKLTIMKVKDCNSLEEIITGKDNVGIALISLEILMLECLPTLNKFCSSKCFLKFPLLKDVVVRECPRMKIFSEGDTSTPNLRKVKIAKNEDEWHWKRNLNDTIKNMFEDKVAFCKFKHLALSEFPELKDLWYDQHHHNVTHNTSNKNCEMILDVIKIDEEKEEEDIIFENLEYLKLTSLSMVQRCDFLSHVLFPSNIMQVLYGLEDLKVKDCDSLEAFCYEKHTFMFPSLLRFVVRECPQMKNFSSAITIAPYLSAIEVENKTMRWKGDLNTTIEQLFKEQ

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold02491	3619	14305	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function

GO:0005515 protein binding

GO:0043531 ADP binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002491s00037478.1	PF00931.17	NB-ARC	199	439	2.90E-51
Glyur002491s00037478.1	PF13855.1	LRR_8	554	613	2.00E-07

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	8.167
SRR1783600	control	7.738
SRR1783602	moderate drought stress	5.202
SRR1811619	moderate drought stress	5.549

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	5.250
DRR006520	Root Summer glycyrrhizin high producing strain	4.956
DRR006521	Root Winter glycyrrhizin high producing strain	0.562
DRR006522	Root Winter glycyrrhizin high producing strain	0.600
DRR006523	Root Summer glycyrrhizin low producing strain	0.011
DRR006524	Root Summer glycyrrhizin low producing strain	0.020
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.458
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.560

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	2.613
SRR2868004	Drought Stress (root)	4.071
SRR2967015	Control (root)	4.390

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.881
SRR9715740	Leaf	0.274
SRR9715741	Leaf	0.748
SRR9715739	Root	0.050
SRR9715742	Root	0.302
SRR9715743	Root	0.200

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	1.523
SRR8400027	Control - Root	0.273