Gene detail information of Glyur002486s00040912 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G78810.2 | 5.00E-23 | |
| NR | XP_004516080.1 | 1.87E-126 | PREDICTED: uncharacterized protein LOC101515428 [Cicer arietinum] |
| trEMBL | tr|V7BWF5|V7BWF5_PHAVU | 1.00E-121 | Uncharacterized protein {ECO:0000313|EMBL:ESW21375.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02486 | 4450 | 9298 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.659 |
| SRR1783600 | control | 8.758 |
| SRR1783602 | moderate drought stress | 9.954 |
| SRR1811619 | moderate drought stress | 9.981 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.791 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.760 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.039 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.812 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.587 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.470 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.330 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.416 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.744 |
| SRR2868004 | Drought Stress (root) | 6.125 |
| SRR2967015 | Control (root) | 5.381 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.519 |
| SRR9715740 | Leaf | 7.008 |
| SRR9715741 | Leaf | 4.419 |
| SRR9715739 | Root | 1.018 |
| SRR9715742 | Root | 4.081 |
| SRR9715743 | Root | 3.130 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.954 |
| SRR8749028 | MeJA induced 9h | 4.626 |
| SRR8749029 | MeJA induced 9h | 3.203 |
| SRR8749030 | Uninduced | 0.841 |
| SRR8749031 | Uninduced | 0.923 |
| SRR8749032 | Uninduced | 0.586 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.831 |
| SRR8400027 | Control - Root | 9.092 |