Gene detail information of Glyur002474s00041838 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G14120.1 | 0 | Major facilitator superfamily protein |
| NR | XP_004513316.1 | 0 | PREDICTED: uncharacterized protein LOC101511301 [Cicer arietinum] |
| COG | YP_002794119.1 | 2.00E-09 | Permease [Laribacter hongkongensis HLHK9] |
| trEMBL | tr|A0A072TXV1|A0A072TXV1_MEDTR | 0 | Nodulin-like/MFS transporter {ECO:0000313|EMBL:KEH22006.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02474 | 26685 | 30939 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002474s00041838.1 | PF06813.8 | Nodulin-like | 15 | 262 | 1.40E-89 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.528 |
| SRR1783600 | control | 11.378 |
| SRR1783602 | moderate drought stress | 10.046 |
| SRR1811619 | moderate drought stress | 9.964 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 28.116 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 27.758 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.936 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.520 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.962 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.017 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.228 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.208 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 71.165 |
| SRR2868004 | Drought Stress (root) | 65.975 |
| SRR2967015 | Control (root) | 70.966 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 21.918 |
| SRR9715740 | Leaf | 14.092 |
| SRR9715741 | Leaf | 21.155 |
| SRR9715739 | Root | 24.109 |
| SRR9715742 | Root | 27.720 |
| SRR9715743 | Root | 29.581 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.346 |
| SRR8749028 | MeJA induced 9h | 17.556 |
| SRR8749029 | MeJA induced 9h | 11.221 |
| SRR8749030 | Uninduced | 9.451 |
| SRR8749031 | Uninduced | 12.500 |
| SRR8749032 | Uninduced | 12.281 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 33.646 |
| SRR8400027 | Control - Root | 25.479 |