Gene detail information of Glyur002469s00034378 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_009630127.1 | 3.14E-75 | PREDICTED: uncharacterized protein LOC104120122 [Nicotiana tomentosiformis] |
| trEMBL | tr|A0A061DW51|A0A061DW51_THECC | 8.00E-67 | DNA/RNA polymerases superfamily protein {ECO:0000313|EMBL:EOX94203.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02469 | 6570 | 12247 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.207 |
| SRR1783600 | control | 0.162 |
| SRR1783602 | moderate drought stress | 0.214 |
| SRR1811619 | moderate drought stress | 0.220 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.744 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.922 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.035 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.018 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.060 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.025 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.349 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.776 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.072 |
| SRR2868004 | Drought Stress (root) | 22.207 |
| SRR2967015 | Control (root) | 18.592 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.021 |
| SRR9715740 | Leaf | 0.487 |
| SRR9715741 | Leaf | 0.196 |
| SRR9715739 | Root | 0.015 |
| SRR9715742 | Root | 1.076 |
| SRR9715743 | Root | 0.832 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.304 |
| SRR8749028 | MeJA induced 9h | 0.570 |
| SRR8749029 | MeJA induced 9h | 0.136 |
| SRR8749030 | Uninduced | 0.085 |
| SRR8749031 | Uninduced | 0.171 |
| SRR8749032 | Uninduced | 0.009 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.658 |
| SRR8400027 | Control - Root | 1.925 |