Gene detail information of Glyur002451s00039914 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G53885.1 | 1.00E-27 | Protein of unknown function (DUF581) |
| NR | XP_003528734.1 | 1.39E-72 | PREDICTED: uncharacterized protein LOC100820059 isoform X1 [Glycine max] |
| trEMBL | tr|I1KHI3|I1KHI3_SOYBN | 5.00E-73 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G05010.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02451 | 3510 | 5046 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002451s00039914.1 | PF04570.9 | DUF581 | 91 | 135 | 5.70E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.623 |
| SRR1783600 | control | 0.656 |
| SRR1783602 | moderate drought stress | 1.334 |
| SRR1811619 | moderate drought stress | 1.149 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 65.334 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 66.511 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.114 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.104 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.640 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.705 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 31.478 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 31.600 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.846 |
| SRR2868004 | Drought Stress (root) | 25.540 |
| SRR2967015 | Control (root) | 20.143 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 101.437 |
| SRR9715740 | Leaf | 61.718 |
| SRR9715741 | Leaf | 88.982 |
| SRR9715739 | Root | 5.993 |
| SRR9715742 | Root | 62.059 |
| SRR9715743 | Root | 54.720 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.140 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 12.846 |
| SRR8749031 | Uninduced | 2.230 |
| SRR8749032 | Uninduced | 3.481 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.431 |
| SRR8400027 | Control - Root | 30.671 |