Gene detail information of Glyur002450s00037527 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | NP_001237767.1 | 1.30E-25 | Bowman-Birk type protease inhibitor-like precursor [Glycine max] |
| Swissprot | tr|P85172|IBB1_LUPAL | 2.00E-19 | Bowman-Birk type proteinase inhibitor {ECO:0000303|PubMed:18474386} |
| trEMBL | tr|B1ACD4|B1ACD4_SOYBN | 5.00E-26 | Putative Bowman-Birk type protease inhibitor {ECO:0000313|EMBL:ACA23206.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02450 | 34157 | 39192 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002450s00037527.1 | PF00228.15 | Bowman-Birk_leg | 123 | 141 | 4.50E-06 |
| Glyur002450s00037527.1 | PF00228.15 | Bowman-Birk_leg | 143 | 169 | 4.10E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.636 |
| SRR1783600 | control | 0.350 |
| SRR1783602 | moderate drought stress | 1.924 |
| SRR1811619 | moderate drought stress | 2.153 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.481 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.665 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.189 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.185 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.742 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.084 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.918 |
| SRR2868004 | Drought Stress (root) | 3.108 |
| SRR2967015 | Control (root) | 2.649 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.141 |
| SRR9715740 | Leaf | 9.425 |
| SRR9715741 | Leaf | 3.599 |
| SRR9715739 | Root | 0.089 |
| SRR9715742 | Root | 0.817 |
| SRR9715743 | Root | 0.758 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.211 |
| SRR8749028 | MeJA induced 9h | 0.045 |
| SRR8749029 | MeJA induced 9h | 0.305 |
| SRR8749030 | Uninduced | 0.039 |
| SRR8749031 | Uninduced | 0.049 |
| SRR8749032 | Uninduced | 0.549 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.241 |
| SRR8400027 | Control - Root | 1.277 |