Gene detail information of Glyur002450s00037526 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | BAF50740.1 | 1.43E-49 | trypsin inhibitor [Apios americana] |
| Swissprot | tr|Q41066|IBB2_PEA | 4.00E-35 | Seed trypsin/chymotrypsin inhibitor TI5-72 (Precursor) |
| trEMBL | tr|A4PIB8|A4PIB8_9FABA | 5.00E-50 | Trypsin inhibitor {ECO:0000313|EMBL:BAF50740.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02450 | 20514 | 20933 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002450s00037526.1 | PF00228.15 | Bowman-Birk_leg | 58 | 82 | 3.00E-08 |
| Glyur002450s00037526.1 | PF00228.15 | Bowman-Birk_leg | 84 | 108 | 9.40E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.139 |
| SRR1783600 | control | 12.216 |
| SRR1783602 | moderate drought stress | 60.040 |
| SRR1811619 | moderate drought stress | 61.771 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.109 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.944 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.008 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.228 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 47.917 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 49.029 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 502.150 |
| SRR2868004 | Drought Stress (root) | 141.350 |
| SRR2967015 | Control (root) | 220.498 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 616.768 |
| SRR9715740 | Leaf | 246.305 |
| SRR9715741 | Leaf | 201.623 |
| SRR9715739 | Root | 71.115 |
| SRR9715742 | Root | 45.580 |
| SRR9715743 | Root | 54.487 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.661 |
| SRR8749030 | Uninduced | 3.627 |
| SRR8749031 | Uninduced | 2.968 |
| SRR8749032 | Uninduced | 18.928 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 331.493 |
| SRR8400027 | Control - Root | 124.753 |