Gene detail information of Glyur002450s00037519 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G00530.1 | 3.00E-20 | |
| NR | KHM99384.1 | 7.66E-38 | hypothetical protein glysoja_028841 [Glycine soja] |
| trEMBL | tr|I1N3P4|I1N3P4_SOYBN | 3.00E-38 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G46590.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02450 | 2843 | 4862 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.708 |
| SRR1783600 | control | 15.595 |
| SRR1783602 | moderate drought stress | 52.047 |
| SRR1811619 | moderate drought stress | 52.073 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 37.199 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 34.788 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 103.534 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 103.423 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 26.686 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 25.218 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.282 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.430 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.585 |
| SRR2868004 | Drought Stress (root) | 13.027 |
| SRR2967015 | Control (root) | 18.787 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.066 |
| SRR9715740 | Leaf | 4.079 |
| SRR9715741 | Leaf | 5.586 |
| SRR9715739 | Root | 2.683 |
| SRR9715742 | Root | 5.618 |
| SRR9715743 | Root | 3.663 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.386 |
| SRR8749028 | MeJA induced 9h | 2.367 |
| SRR8749029 | MeJA induced 9h | 1.417 |
| SRR8749030 | Uninduced | 3.750 |
| SRR8749031 | Uninduced | 1.546 |
| SRR8749032 | Uninduced | 5.288 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.471 |
| SRR8400027 | Control - Root | 9.759 |