Gene detail information of Glyur002442s00040626 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G10030.1 | 2.00E-105 | aspartate/glutamate/uridylate kinase family protein |
| NR | XP_004497592.1 | 4.04E-174 | PREDICTED: uridylate kinase-like [Cicer arietinum] |
| COG | YP_004113045.1 | 4.00E-78 | uridylate kinase [Desulfurispirillum indicum S5] |
| trEMBL | tr|A7UQU8|A7UQU8_MEDTR | 5.00E-174 | Homeodomain-like; Uridylate kinase {ECO:0000313|EMBL:ABE80123.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02442 | 467 | 3094 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002442s00040626.1 | PF00696.23 | AA_kinase | 27 | 237 | 9.40E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.694 |
| SRR1783600 | control | 8.366 |
| SRR1783602 | moderate drought stress | 10.207 |
| SRR1811619 | moderate drought stress | 10.726 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.602 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.365 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 18.234 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 18.681 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 27.855 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 28.048 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.010 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.786 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.950 |
| SRR2868004 | Drought Stress (root) | 10.206 |
| SRR2967015 | Control (root) | 9.624 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.904 |
| SRR9715740 | Leaf | 4.182 |
| SRR9715741 | Leaf | 3.646 |
| SRR9715739 | Root | 2.400 |
| SRR9715742 | Root | 4.661 |
| SRR9715743 | Root | 3.612 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.880 |
| SRR8749028 | MeJA induced 9h | 15.420 |
| SRR8749029 | MeJA induced 9h | 12.513 |
| SRR8749030 | Uninduced | 12.878 |
| SRR8749031 | Uninduced | 11.967 |
| SRR8749032 | Uninduced | 19.139 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.575 |
| SRR8400027 | Control - Root | 3.255 |