Gene detail information of Glyur002438s00041138 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G73440.1 | 8.00E-22 | calmodulin-related |
| NR | XP_003605198.1 | 3.76E-86 | hypothetical protein MTR_4g026500 [Medicago truncatula] |
| trEMBL | tr|G7JFX4|G7JFX4_MEDTR | 1.00E-86 | EF-hand pair protein {ECO:0000313|EMBL:AES87395.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02438 | 14633 | 17959 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.321 |
| SRR1783600 | control | 5.239 |
| SRR1783602 | moderate drought stress | 4.096 |
| SRR1811619 | moderate drought stress | 3.990 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.213 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.871 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.676 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.589 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.130 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.533 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.978 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.539 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.328 |
| SRR2868004 | Drought Stress (root) | 13.283 |
| SRR2967015 | Control (root) | 12.792 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.657 |
| SRR9715740 | Leaf | 10.728 |
| SRR9715741 | Leaf | 11.192 |
| SRR9715739 | Root | 0.852 |
| SRR9715742 | Root | 5.296 |
| SRR9715743 | Root | 3.556 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.081 |
| SRR8749028 | MeJA induced 9h | 15.181 |
| SRR8749029 | MeJA induced 9h | 14.078 |
| SRR8749030 | Uninduced | 5.429 |
| SRR8749031 | Uninduced | 3.173 |
| SRR8749032 | Uninduced | 2.558 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.186 |
| SRR8400027 | Control - Root | 18.414 |