Gene detail information of Glyur002426s00035834 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G34980.1 | 0 | subtilisin-like serine protease 2 |
| NR | XP_003540860.1 | 0 | PREDICTED: subtilisin-like protease-like [Glycine max] |
| COG | YP_001709364.1 | 2.00E-112 | peptidase [Clavibacter michiganensis subsp. sepedonicus] |
| Swissprot | tr|O65351|SUBL_ARATH | 0 | Subtilisin-like protease (Precursor) |
| trEMBL | tr|I1LPR5|I1LPR5_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G03570.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02426 | 1193 | 3541 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002426s00035834.1 | PF05922.11 | Inhibitor_I9 | 43 | 113 | 2.40E-12 |
| Glyur002426s00035834.1 | PF00082.17 | Peptidase_S8 | 141 | 625 | 2.00E-42 |
| Glyur002426s00035834.1 | PF02225.17 | PA | 397 | 476 | 2.30E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 136.543 |
| SRR1783600 | control | 136.686 |
| SRR1783602 | moderate drought stress | 135.760 |
| SRR1811619 | moderate drought stress | 139.286 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 141.972 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 141.237 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 33.914 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 33.453 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 143.125 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 145.462 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 50.121 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 49.884 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 98.806 |
| SRR2868004 | Drought Stress (root) | 86.710 |
| SRR2967015 | Control (root) | 109.131 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 79.572 |
| SRR9715740 | Leaf | 52.951 |
| SRR9715741 | Leaf | 50.625 |
| SRR9715739 | Root | 369.729 |
| SRR9715742 | Root | 228.019 |
| SRR9715743 | Root | 227.382 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 47.607 |
| SRR8749028 | MeJA induced 9h | 13.508 |
| SRR8749029 | MeJA induced 9h | 7.794 |
| SRR8749030 | Uninduced | 1.365 |
| SRR8749031 | Uninduced | 0.113 |
| SRR8749032 | Uninduced | 0.417 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 121.450 |
| SRR8400027 | Control - Root | 195.234 |