Gene detail information of Glyur002424s00042165 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004513385.1 | 2.74E-12 | PREDICTED: scarecrow-like protein 3-like [Cicer arietinum] |
| trEMBL | tr|I1JWI2|I1JWI2_SOYBN | 3.00E-11 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G28490.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02424 | 4609 | 6270 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.194 |
| SRR1783600 | control | 1.754 |
| SRR1783602 | moderate drought stress | 0.367 |
| SRR1811619 | moderate drought stress | 0.673 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.558 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.577 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.274 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.366 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.279 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.868 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.072 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.939 |
| SRR2868004 | Drought Stress (root) | 1.962 |
| SRR2967015 | Control (root) | 1.613 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.429 |
| SRR9715740 | Leaf | 0.890 |
| SRR9715741 | Leaf | 0.770 |
| SRR9715739 | Root | 0.166 |
| SRR9715742 | Root | 0.130 |
| SRR9715743 | Root | 0.146 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.302 |
| SRR8749028 | MeJA induced 9h | 2.055 |
| SRR8749029 | MeJA induced 9h | 1.984 |
| SRR8749030 | Uninduced | 1.195 |
| SRR8749031 | Uninduced | 1.103 |
| SRR8749032 | Uninduced | 1.299 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.653 |
| SRR8400027 | Control - Root | 2.544 |