Gene detail information of Glyur002422s00039998 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_006574175.1 | 2.29E-12 | PREDICTED: uncharacterized protein LOC102661460 [Glycine max] |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02422 | 34289 | 34832 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 22.196 |
| SRR1783600 | control | 19.901 |
| SRR1783602 | moderate drought stress | 40.785 |
| SRR1811619 | moderate drought stress | 40.782 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.234 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.806 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.553 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.448 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.461 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.317 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.215 |
| SRR2868004 | Drought Stress (root) | 0.149 |
| SRR2967015 | Control (root) | 0.784 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.317 |
| SRR9715740 | Leaf | 0.694 |
| SRR9715741 | Leaf | 0.847 |
| SRR9715739 | Root | 14.650 |
| SRR9715742 | Root | 7.748 |
| SRR9715743 | Root | 7.454 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.361 |
| SRR8400027 | Control - Root | 5.911 |