Gene detail

Gene detail information of Glyur002422s00039997.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G21270.1	3.00E-147	wall-associated kinase 2
NR	KEH40343.1	0	wall-associated receptor kinase-like protein [Medicago truncatula]
COG	YP_001958461.1	9.00E-24	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|Q9LMP1\|WAK2_ARATH	0	Wall-associated receptor kinase 2 (Precursor)
trEMBL	tr\|A0A072VFY8\|A0A072VFY8_MEDTR	0	Wall-associated receptor kinase-like protein {ECO:0000313\|EMBL:KEH40343.1}

Sequence

Transcript Sequence

>Glyur002422s00039997.1
TGCAGTGCTAACTCAAAGCAAGCAAGCAATATCCCATATATTGTCTCTTCCAAATTAAGGCCTAATTTCTAGTGTTTTTTGCGACTGATCCAATTGAAGACGGACAATATGAAAGCGAAGGAGAAGCTGCACAGTACGCAACTGTTGATGATGGTTGCATATTTAGCCATGCAGTTGGTAGGAACAGTAATTATTGCAGCCGATGATCAAGCAGCCCCTTCTCCAGCACCAGCACCAGCAGTAGCACCAAAATTACAATTAGCCCTGCCTGGCTGCCCTTCCACTTGTGGGGATGTCCAAATTCCATACCCATTTGGCATAGGCAATTCATCTACACCAGGTGATAATAAAAAACCCTGTTACTTGGAGGACAGNTTTANNCTCACTTGCAGTAATGACTCCAAATTATTATATTCGGGTAACTTACAAGTCTTACGCATAGACATCCTCCAAGGTCAGCTTGACTTCTTGTTTTACGTCGCATCGACTTGCAATGGTAATNATCGCATTCGCAANCTCACCTCTGGTTATTTCAGCATTTCAAGGAAGGAAAACAGGTTCGTGACTGTTGGCTGCGACAGTTTTGGTAATCTCAATAGCAGTTTTGACGGGGACTTATACATGATGGGGTGCCTAACAAGGTGTTATGGCCACCATAGAAAGATCCAGAATGGAACGTGTTCGGGTATAGGGTGTTGCCAGATGAATATTCCTCCTAGGATGAGGAATATCAGCATAGAAGTTATAGCCTACTCCAGGGCTATTTCTTCGCCTTCCAGCATATCAGCAAAGGAATCTCTGGAAGTGGAAACCAGCTGCACCTCTTCCTTCGTTGTCAAGCAAAACGACTATGCTTTTTCAACCAGTCATTTACAAGGTTTACCTCACCTGAAATACCCTATGGTTGTTGACTGGACCGTAGGTGACCAGAACTGTAGTGTGGCTCCCCATAAAATCGATTATGCGTGCAGGAACAATAGCCATTGCAATAACACGGACACAGATTTTGGTTACCGATGCGAATGCAATCCAGGTTTTGAACGAAACCCGTACCATCCCGATGGTTGCACAGACATAGATGAATGTAAGATAGGAAGTCATAGATGCATAAGCAAAGATAATTGTAACAACACCATTGGGAATTACACATGTTTCTGTCCTGAGGGGCAATTTGGAGATGGAACAAAGGAAGGAATTGGGTGCAAACCACATGATGAACCACATGATGAACGACATGATGAACGCACGAAGATTGTCATCGGAGCTGGAATAGGAGCTAGTGTTCTATTTGTAGGGACTACTTCACTATACTTGAATTTGAAGTGCAAGAAATGGAAACTCATCAAAATGAAAAAGAAATTCTTTCAACAAAATGGCGGTTTCCTTTTGAAACAACAAATCTCTAAAGGAAAAGACTCCTCCCAAACTGCTCAAATATTGACAGAAAATCAACTAAAGAAGGCCACCAACAACTTTGACGAGAGTTTCATCATTGACAGAGGTGGTTTTGGCACCGTTTACAAAGGATTTCTACCAAATAATACAACCATTGCAGTCAAGAAGTCCAAAATAATGAATGTGAGCCAAATCGAGCAGTTTATTAACGAGGTGGATGTCCTCCTCAAAATAAATCATAGGAATGTGGTTAAACTCTTGGGGTGTTGTTTAGAGACAGAGGTTCCTTTGTTGGTGTATAAATCTGTGAACAATGGTACCCTATTTGAATTTTTACACACAAAAGGTAAGGCGAATAATGTAATATGGAAAACTCGTTTAAGGATAGCAACAGAGGTAGCTGGAGCTCTATCATATCTACATTCATCTGCCTCAATACCCATTATCCATAGAGATGTGAAGAGTGCCAACATTCTATTGGACGACACTTACACTGCAAAAGTGTCTGATTTTGGAGCTTCAAGATTGGTTCCACTTGATCAAATTGAAATAGCCACAATGGTGCAAGGGACTATTGGCTACTTAGACCCAGAGTATATGCAGACAAACCAATTGACTGAGAAAAGTGATGTGTATAGCTTTGGGGTAGTGCTTGTGGAGCTGCTAACAGGGGAGAAACCTTTTCCCTCTGTTAGGAAAGAAGAGAAAGAGAAAAGAAGCCTTGCTATGCACTTTCTATCTTGCTTAAAAGAGGATCGTGTTTTTGAAGTTATTCAAGATGGCATATTGGATGAAGAAAATGAGCAGGAGATCAAGGAGGTTGCTATTCTTGCAGCAAAGTGCTTGAGACTTAAAGGGGAGGAAAGACCTACCATGGAGGAAGTCGTTGTGGAGTTGGAGGGAATTATGAAGTCAATGGAGAAGCATTCTTGGATTAATTCAGACATAATTGTAGAGGAGCTTAATGAAATATCACCATCTAATATTTTTGAACCTGGTGATAGCAGCGGACATGGAAGTATTGTGTATGACCGCTTGGTGAAAGCAGTGGACATGGTACTGGATATGACAGCTTGAAAGATGGTGCACAGTTGATTGTCTTGGATGATGGAAGATGATTATGGCATGGCAACAAATATATATATATATATATATATGCTCCATTTTATATCAGTGTTCTGCTACGACCTATATATTGTAATCTTTATGAACAATCATATCCTTTTGTTGTTTTGTTTTCGTCAATGTCTATGTGTATTGTGTATGTGAAACACGATATCTTCTCTGGACCTGGATCCTCTGCAGCCGCTGCAGAGAGATCCACTCTCTCTGTCTCTCTCCTCATTTTTCTCTCTCTCTTACTTTTTTCTCTCTCTTCCCTCACTCACAACACCCTGCTGCAGGGGCAGCAGGGGATCCAGAGTGTATCTTCTCTTAGCTTATGACATTTTATCACATGTGCGTGTGTATGTG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold02422	29447	39915	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.17.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005509 calcium ion binding

GO:0005515 protein binding

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

GO:0030247 polysaccharide binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002422s00039997.1	PF13947.1	GUB_WAK_bind	54	157	1.60E-19
Glyur002422s00039997.1	PF07645.10	EGF_CA	322	353	6.70E-08
Glyur002422s00039997.1	PF07714.12	Pkinase_Tyr	462	728	1.40E-48

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.990
SRR1783600	control	3.019
SRR1783602	moderate drought stress	7.652
SRR1811619	moderate drought stress	7.415

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.928
DRR006520	Root Summer glycyrrhizin high producing strain	2.835
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.163
DRR006524	Root Summer glycyrrhizin low producing strain	0.192
DRR006525	Leaf Summer glycyrrhizin high producing strain	18.414
DRR006526	Leaf Summer glycyrrhizin high producing strain	18.774

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.015
SRR2868004	Drought Stress (root)	0.000
SRR2967015	Control (root)	0.009

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	12.019
SRR9715740	Leaf	10.482
SRR9715741	Leaf	11.504
SRR9715739	Root	4.920
SRR9715742	Root	19.976
SRR9715743	Root	18.434

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.010

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	1.897
SRR8400027	Control - Root	0.647