Gene detail

Gene detail information of Glyur002422s00039994.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G21240.1	3.00E-122	wall associated kinase 3
NR	KEH40343.1	0	wall-associated receptor kinase-like protein [Medicago truncatula]
COG	YP_001958461.1	2.00E-23	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|Q9LMP1\|WAK2_ARATH	2.00E-150	Wall-associated receptor kinase 2 (Precursor)
trEMBL	tr\|A0A072VFY8\|A0A072VFY8_MEDTR	0	Wall-associated receptor kinase-like protein {ECO:0000313\|EMBL:KEH40343.1}

Sequence

Transcript Sequence

>Glyur002422s00039994.1
AACAAGGTGTTCCTCCCAACAAGAAACTCCCCCGTGGTTTTTGATTGGACCGTAGGAAACCGGAGCTGTAGTGTTGCTTCCCAGAATAGATCCCACTACGCGTGCAGGGCCAATAGCCAATGCAATGACACGGACACGGATTTTGGTTACCGATGCATATGCAAACAAGGTTACGAAGGAAACCCGTACCATCCCGATGGCTGCACAGATATAGACGAATGTAAGACAGGAAATCATACATGTATCAGCAGGGAAAATTGTAACAACACCAATGGGAGTCACACATGTCTCTGTCCTAAGGGGCAATATGGAGATGGAACACAGCAAGGAACTCGGTGCTACCGACATAATGTGTACATGAAGATTGTCATCGGAGCTGGAATAGGAGTTATTGTTCTATTTGTAGGGATTACCTCACTATTCTTGATGTACCAGAAAAGGAAACTCATCAAAATGAAAGAGAAATTCTTTCAACAAAATGGCGGTTTCCTTTTGAAACAACAAATCTCTAAAAGAAAAGACTCCTCCCAAACTGCTCAAATATTCACAGAAGGTCAACTAAAGAAGGCCACCGACAACTTTGACGAGAGGTTAATCATTGGCAGAGGTGGTTTTGGCACCGTTTACAAAGGATTTCTACCAAATAATAGAATCATTGCTGTCAAGAAGTCCAAAACGATGGATGCGAGCCAAATTGAGCAGTTCATTAACGAAGTGGATGTTCTCCTCCAAATAAACCATAGGAATGTGGTTAAACTCTTGGGGTGTTGTTTAGAGACAAAGGTTCCTTTGTTGGTTTATGAATTTGTGAGCAATGGTACCCTATTTGAATTTTTACACACAGAAGGTAAGGCGAATAATGCAACATGGAACATTCGTCTAAGGGTAGCAGCAGACGTAGCTGGAGCCTTGTCATACCTGCATTCATCTGTCTCAATACCCATTATCCACAGCGATGTGAAGAGTGCCAACATTCTATTGGATGACACTTACACTGCTAAAGTGTCTGATTTTGGGGCTTCAAGATTGGGTCCCCTTGATCAAGAAATAGCCGCAGTGGTGCAAGGGACCATTGGCTACTTAGACCCAGACTTTGGGGTAGTGCTTGTGGAGCTGCTAACTGGGGAGAAACCTTTTCCCTCTATTAGGAAAGAAGAGAAAGAGAAAAGAAGTCTTGCTATGCACTTTCTATCTTGCTTAAAAGAGGATCGTGTTTTTGAAGTTATTCAAGATGGCATCTTGAACGAAGAAAATAAGCAGGAGATCAAGGAGGTTGCTATTCTTGCAGCAGAGTGCTTGAAACTTAAAGGGGAGGAAAGGCCTAGCATGAAGGAAGTGGCCATGGAGTTGGAGGGAATTATGAGGTCAATGGAGAAGCATTCTTGGATTAATTCAGACATAAATGTAGAGGAGCTTAATGAAATATCATCATCTAAAATTTATGAACCTGGTGATAGCAGCGGACATGGAAGTACTGGGTATGACAGCTTGAAAGATGGTGCACAGCTGATTGTCTTGGATGATGGAAGATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold02422	11597	13433	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.17.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005509 calcium ion binding

GO:0005515 protein binding

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002422s00039994.1	PF07645.10	EGF_CA	70	109	1.00E-07
Glyur002422s00039994.1	PF00069.20	Pkinase	199	446	1.00E-35

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.951
SRR1783600	control	0.938
SRR1783602	moderate drought stress	4.010
SRR1811619	moderate drought stress	3.921

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	3.900
DRR006520	Root Summer glycyrrhizin high producing strain	3.692
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.071
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	10.623
DRR006526	Leaf Summer glycyrrhizin high producing strain	10.229

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.000
SRR2868004	Drought Stress (root)	0.000
SRR2967015	Control (root)	0.000

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.937
SRR9715740	Leaf	3.675
SRR9715741	Leaf	3.295
SRR9715739	Root	0.521
SRR9715742	Root	4.358
SRR9715743	Root	3.605

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.023
SRR8749028	MeJA induced 9h	0.054
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.034
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.031

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	2.914
SRR8400027	Control - Root	1.351