Gene detail information of Glyur002421s00038663 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G16860.1 | 1.00E-37 | GCIP-interacting family protein |
| NR | XP_004497176.1 | 2.83E-82 | PREDICTED: pre-mRNA-splicing factor syf2-like [Cicer arietinum] |
| trEMBL | tr|I3S3H4|I3S3H4_LOTJA | 2.00E-79 | Uncharacterized protein {ECO:0000313|EMBL:AFK34816.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02421 | 689 | 3105 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.515 |
| SRR1783600 | control | 15.144 |
| SRR1783602 | moderate drought stress | 4.488 |
| SRR1811619 | moderate drought stress | 4.517 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.118 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.233 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.360 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.119 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.964 |
| SRR2868004 | Drought Stress (root) | 14.213 |
| SRR2967015 | Control (root) | 18.551 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.756 |
| SRR9715740 | Leaf | 17.388 |
| SRR9715741 | Leaf | 27.015 |
| SRR9715739 | Root | 2.560 |
| SRR9715742 | Root | 18.460 |
| SRR9715743 | Root | 16.032 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.985 |
| SRR8400027 | Control - Root | 6.413 |