Gene detail information of Glyur002414s00038661 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G54090.1 | 0 | fructokinase-like 1 |
| NR | XP_003516930.1 | 0 | PREDICTED: fructokinase-2-like [Glycine max] |
| COG | YP_002521328.1 | 9.00E-37 | putative fructokinase [Thermomicrobium roseum DSM 5159] |
| Swissprot | tr|Q9M394|SCKL1_ARATH | 0 | Fructokinase-like 1, chloroplastic {ECO:0000312|EMBL:AEE79187.1} (Precursor) |
| trEMBL | tr|I1J756|I1J756_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G26990.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02414 | 35185 | 38630 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002414s00038661.1 | PF00294.19 | PfkB | 139 | 458 | 1.40E-37 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.432 |
| SRR1783600 | control | 6.399 |
| SRR1783602 | moderate drought stress | 8.081 |
| SRR1811619 | moderate drought stress | 7.986 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.162 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.567 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.482 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.332 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.016 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.613 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.116 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.737 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.456 |
| SRR2868004 | Drought Stress (root) | 4.337 |
| SRR2967015 | Control (root) | 5.037 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.753 |
| SRR9715740 | Leaf | 26.972 |
| SRR9715741 | Leaf | 17.463 |
| SRR9715739 | Root | 0.901 |
| SRR9715742 | Root | 4.601 |
| SRR9715743 | Root | 5.097 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.081 |
| SRR8749028 | MeJA induced 9h | 12.468 |
| SRR8749029 | MeJA induced 9h | 8.711 |
| SRR8749030 | Uninduced | 7.467 |
| SRR8749031 | Uninduced | 10.304 |
| SRR8749032 | Uninduced | 8.020 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.276 |
| SRR8400027 | Control - Root | 6.573 |