Gene detail information of Glyur002413s00035795 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G73390.3 | 8.00E-133 | Endosomal targeting BRO1-like domain-containing protein |
| NR | XP_004512801.1 | 0 | PREDICTED: uncharacterized protein LOC101512481 isoform X1 [Cicer arietinum] |
| trEMBL | tr|V7C2Y1|V7C2Y1_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW24514.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02413 | 29199 | 34306 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002413s00035795.1 | PF03097.13 | BRO1 | 144 | 285 | 1.40E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.482 |
| SRR1783600 | control | 3.885 |
| SRR1783602 | moderate drought stress | 4.607 |
| SRR1811619 | moderate drought stress | 4.338 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.680 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.999 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.479 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.051 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.922 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.040 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.401 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.036 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.121 |
| SRR2868004 | Drought Stress (root) | 4.851 |
| SRR2967015 | Control (root) | 4.175 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.837 |
| SRR9715740 | Leaf | 4.683 |
| SRR9715741 | Leaf | 5.944 |
| SRR9715739 | Root | 2.749 |
| SRR9715742 | Root | 4.919 |
| SRR9715743 | Root | 4.259 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.304 |
| SRR8749028 | MeJA induced 9h | 1.155 |
| SRR8749029 | MeJA induced 9h | 1.180 |
| SRR8749030 | Uninduced | 0.166 |
| SRR8749031 | Uninduced | 0.138 |
| SRR8749032 | Uninduced | 0.160 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.523 |
| SRR8400027 | Control - Root | 10.573 |