Gene detail information of Glyur002399s00033214 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G65020.1 | 3.00E-125 | annexin 2 |
| NR | XP_004504069.1 | 0 | PREDICTED: annexin D2-like [Cicer arietinum] |
| Swissprot | tr|Q9XEE2|ANXD2_ARATH | 2.00E-167 | Annexin D2 |
| trEMBL | tr|I3RZY7|I3RZY7_LOTJA | 0 | Annexin {ECO:0000256|RuleBase:RU003540} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02399 | 15364 | 18268 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002399s00033214.1 | PF00191.15 | Annexin | 16 | 80 | 1.00E-21 |
| Glyur002399s00033214.1 | PF00191.15 | Annexin | 87 | 152 | 1.00E-18 |
| Glyur002399s00033214.1 | PF00191.15 | Annexin | 171 | 234 | 1.70E-15 |
| Glyur002399s00033214.1 | PF00191.15 | Annexin | 245 | 310 | 3.50E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 114.452 |
| SRR1783600 | control | 114.440 |
| SRR1783602 | moderate drought stress | 42.795 |
| SRR1811619 | moderate drought stress | 43.039 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 122.500 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 121.145 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.230 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.026 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 25.215 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 25.389 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.565 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.518 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 209.773 |
| SRR2868004 | Drought Stress (root) | 77.342 |
| SRR2967015 | Control (root) | 88.294 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 20.653 |
| SRR9715740 | Leaf | 4.214 |
| SRR9715741 | Leaf | 7.229 |
| SRR9715739 | Root | 15.023 |
| SRR9715742 | Root | 47.224 |
| SRR9715743 | Root | 39.669 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 137.303 |
| SRR8749028 | MeJA induced 9h | 80.058 |
| SRR8749029 | MeJA induced 9h | 145.512 |
| SRR8749030 | Uninduced | 63.876 |
| SRR8749031 | Uninduced | 84.575 |
| SRR8749032 | Uninduced | 83.015 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 112.815 |
| SRR8400027 | Control - Root | 138.421 |