Gene detail

Gene detail information of Glyur002389s00038674.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G51550.1	1.00E-150	Malectin/receptor-like protein kinase family protein
NR	XP_003520131.2	0	PREDICTED: receptor-like protein kinase FERONIA-like [Glycine max]
COG	YP_001958461.1	2.00E-21	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|Q9SCZ4\|FERON_ARATH	3.00E-176	Receptor-like protein kinase FERONIA (Precursor)
trEMBL	tr\|I1JEJ2\|I1JEJ2_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA02G13470.1}

Sequence

Transcript Sequence

>Glyur002389s00038674.1
ATGAAATGTATCAATGTAGAGAAACTAGCTTATGGTTATACATGTTGTCTGCATAGAATGATGAACTGTGTCACATGTTTCATGTACATTTTTTTCATAAACTTCTATCTCCTACAACTAATAGCTGCTGCTGACAAAGCCAGTTATGTTCCCTCAGAGAACATAGTCCTCAACTGTGGGTCAAACACTTCTGAAATTGTACATTATGATGGCAGAAACTGGACTGGTGACACTGCTTCACCATATGTGCCCTCTGATGCAGAAATCAAGTCCCTGATAGCAAGAGCACCTGCCACACCTCAATCTATTCCTGANGTTCCCTACATGACTGCTCGGATCTTTCAGTCTCAATTCACCTACAGATTCAATGTAACCCCAGGTCCAAAATTCATACGCCTTCACTTCTACCCTGCTTCCTATTTGTATCTCAATATCTCCAAAGCCTTCTTATCAGTCAGTGCATGTGACTTCACTNTTCTCCATAACTTCAGTGCTTCCCTCAATGCTGATTACTTCAACTTACCATATTTGATGAAAGAATTCATTGTCCATGTAAGTGGGAACACTCTAGAACTTACTCTCACCCCATCATCATCCAATGCTTCTGATGCCTATGCATTTGTGAATGGGATTGAAGTTGTTTCAATGCCCCTTGGCTTATACATTCGTGGNGATGATGCCCCTCTTCCTTTAGTTGGCCACGATTCCACAGTGGTGTACATCTATAATGATACTGCCATGGAAAATTTATACAGATTGAATGTGGGAGGGGAGCAGATTCTACCCAAATACGATACAGGTATGTTTCGCAGTTGGGACACTGACGATGTTTACATCTTCGGGTCCGAAGGGATTGAAGTCTTTAATATGAGCATGCCAGTTGTGTATGCAGATAATGTTCCAGCATATGCTGCCCCTGACAATGAGGTTGTTTTCTCTGTGTTTCTAAACAATCAAACAGCTTATGAACAATTTGATCCAATTGCCTTGAGTGGGGGGCCTGGAGTTGCTGTATACCAAGACTATGTCGTGATGGTTCTCAAAGACAGTGAGGGAAAGCAGGATCTGTGGCTAGATCTACACCCGAACAAGGATTCAAAACCAATGTACTACACTGCTTTCTTGAATGGTGTAGAGATCTTCAAACTGAGCAGTGTTGGTGAGAAGAATCTTGCAGGGCTTAACCCTTCCAAAAGTAAGTCTGAATCATCTGCAAAGGCTCCCCGTGTTGTTACACAGGTTAAAAATTCTTCAAAGAGACTCACATTCATCCTCATTGGTTGTGGACTTGGTGCAGTGGCACTACCAATTCTCCTGTGCTTAGTTCTATACAGGCTGAAGGTGATTAGGCCTAAAAGGATCATGTCATGGTGCGGTAGCATTGTCCCTCCACCTAATCAAATTGAAAAAGCAAAAAACAAGTCATCATTTTGCTGTCATTTTTCATTAGGGGAGATAAAAGTAGCAACAAATGACTTTGACGAGGCTCTGCTTATAGGCACAGGTGGATTTGGCAGCGTTTACAAGGGTAGCTTTGATGGTGGGGCAACTTCTATAGCCATAAAGCGTGCCAATCCAATGTCAGAACAAGGTGTTACTGAATTTGAGACAGAGATCCATTTGCTCTCGCANCTTCGGCATAATAACCTAGTNCCACTATTGGGTTATTGCAATGAAGATGGGGAGATGATACTTGTCTATGACTTCATGGCCAATGGAACTCTGTATGGCCATATTCACTNGAGGCAAAGAGATCAACCCCCTTTGTCATGGATTCAACGTCTTGAGATGTGCATTGGAGTTGCAAGAGGTTTGCACCACCTACACACTGGTACACAGCATAAGATCATTCACCGCGACATCAAGACAACCAACATACTCTTAGACCATAACTGGGTGGCCAAAATTTCAGATTTTGGGTTGTCAAAGGCAAGCTACCCTTCCTTGAGCANCACCGTTGTCAAGGGTAGCATCGGTTATCTAGATCCAGAGTATTATCAAGGCCACAAGTTGACTGAGAAATCTGATTTATACTCACTTGGGGTTGTGTTGNAGGGGCCTGGAGTTGCTGTATACCAAGACTATGTCGTGATGGTTCTCAAAGACAGTGAGGGAAAGCAGGATCTGTGGCTAGATCTACACCCGAACAAGGATTCAAAACCAATGTACTACACTGCTTTCTTGAATGGTGTAGAGATCTTCAAACTGAGCAGTGTTGGTGAGAAGAATCTTGCAGGGCTTAACCCTTCCAAAAGTAAGTCTGAATCATCTGCAAAGGCTCCCCGTGTTGTTACACAGGTTAAAAATTCTTCAAAGAGACTCACATTCATCCTCATTGGTTGTGGACTTGGTGCAGTGGCACTACCAATTCTCCTGTGCTTAGTTCTATACAGGCTGAAGGTGATTAGGCCTAAAAGGATCATGTCATGGTGCGGTAGCATTGTCCCTCCACCTAATCAAATTGAAAAAGCAAAAAACAAGTCATCATTTTGCTGTCATTTTTCATTAGGGGAGATAAAAGTAGCAACAAATGACTTTGACGAGGCTCTGCTTATAGGCACAGGTGGATTTGGCAGCGTTTACAAGGGTAGCTTTGATGGTGGGGCAACTTCTATAGCCATAAAGCGTGCCAATCCAATGTCAGAACAAGGTGTTACTGAATTTGAGACAGAGATCCATTTGCTCTCGCACCTTCGGCATAATAACCTAGTGCCACTATTGGGTTATTGCAATGAAGATGGGGAGATGATACTTGTCTATGACTTCATGGCCAATGGAACTCTGTATGGCCATATTCACTTGAGGCAAAGAGATCAACCCCCTTTGTCATGGATTCAACGTCTTGAGATGTGCATTGGAGTTGCAAGAGGTTTGCACCACCTACACACTGGTACACAGCATAAGATCATTCACCGCGACATCAAGACAACCAACATACTCTTAGACCATAACTGGGTGGCCAAAATTTCAGATTTTGGGTTGTCAAAGGCAAGCTACCCTTCCTTGAGCACCACCGTTGTCAAGGGTAGCATCGGTTATCTAGATCCAGAGTATTATCAAGGCCACAAGTTGACTGAGAAATCTGATTTATACTCACTTGGGGTTGTGTTGCCAGCTGTAAGTCCATGTGAAGATGACGAGCATTCAAACTTGGCTGAATGGGTTGTGTTTTGCTTTGAGAATGGCAATGTAGAGCAAATAGTGGACCCCAGCNTAGAAGGGGACATTGTTAAGGAGTGCTTTGAGGTATATTTAGGAGTTGCAATGAAATGTCTGGCCGAAAGAGGAGTGGAGAGGCCATCCACTGGTGAAGTGCTGCAGAGCCTTGATCTGGCAATGCAACTTCAGAAAAATGCTGGTACTGTCCGAGATGGGAATATACATAGGAATGATAATACTGGTTTGCAGGGNTATTCAGATTTGACACCTGGGATTGAGTTCTCTGATATCATGATGCCTGTTGGCAGGTGA

Protein Sequence

>Glyur002389s00038674.1
MKCINVEKLAYGYTCCLHRMMNCVTCFMYIFFINFYLLQLIAAADKASYVPSENIVLNCGSNTSEIVHYDGRNWTGDTASPYVPSDAEIKSLIARAPATPQSIPXVPYMTARIFQSQFTYRFNVTPGPKFIRLHFYPASYLYLNISKAFLSVSACDFTXLHNFSASLNADYFNLPYLMKEFIVHVSGNTLELTLTPSSSNASDAYAFVNGIEVVSMPLGLYIRGDDAPLPLVGHDSTVVYIYNDTAMENLYRLNVGGEQILPKYDTGMFRSWDTDDVYIFGSEGIEVFNMSMPVVYADNVPAYAAPDNEVVFSVFLNNQTAYEQFDPIALSGGPGVAVYQDYVVMVLKDSEGKQDLWLDLHPNKDSKPMYYTAFLNGVEIFKLSSVGEKNLAGLNPSKSKSESSAKAPRVVTQVKNSSKRLTFILIGCGLGAVALPILLCLVLYRLKVIRPKRIMSWCGSIVPPPNQIEKAKNKSSFCCHFSLGEIKVATNDFDEALLIGTGGFGSVYKGSFDGGATSIAIKRANPMSEQGVTEFETEIHLLSXLRHNNLVPLLGYCNEDGEMILVYDFMANGTLYGHIHXRQRDQPPLSWIQRLEMCIGVARGLHHLHTGTQHKIIHRDIKTTNILLDHNWVAKISDFGLSKASYPSLSXTVVKGSIGYLDPEYYQGHKLTEKSDLYSLGVVLXGPGVAVYQDYVVMVLKDSEGKQDLWLDLHPNKDSKPMYYTAFLNGVEIFKLSSVGEKNLAGLNPSKSKSESSAKAPRVVTQVKNSSKRLTFILIGCGLGAVALPILLCLVLYRLKVIRPKRIMSWCGSIVPPPNQIEKAKNKSSFCCHFSLGEIKVATNDFDEALLIGTGGFGSVYKGSFDGGATSIAIKRANPMSEQGVTEFETEIHLLSHLRHNNLVPLLGYCNEDGEMILVYDFMANGTLYGHIHLRQRDQPPLSWIQRLEMCIGVARGLHHLHTGTQHKIIHRDIKTTNILLDHNWVAKISDFGLSKASYPSLSTTVVKGSIGYLDPEYYQGHKLTEKSDLYSLGVVLPAVSPCEDDEHSNLAEWVVFCFENGNVEQIVDPSXEGDIVKECFEVYLGVAMKCLAERGVERPSTGEVLQSLDLAMQLQKNAGTVRDGNIHRNDNTGLQGYSDLTPGIEFSDIMMPVGR

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold02389	8891	16412	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.3.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002389s00038674.1	PF12819.2	Malectin_like	57	274	2.90E-25
Glyur002389s00038674.1	PF12819.2	Malectin_like	307	383	6.90E-08
Glyur002389s00038674.1	PF00069.20	Pkinase	498	684	6.70E-39
Glyur002389s00038674.1	PF00069.20	Pkinase	851	1039	8.50E-40

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.094
SRR1783600	control	2.039
SRR1783602	moderate drought stress	4.136
SRR1811619	moderate drought stress	4.074

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.676
DRR006520	Root Summer glycyrrhizin high producing strain	0.604
DRR006521	Root Winter glycyrrhizin high producing strain	0.321
DRR006522	Root Winter glycyrrhizin high producing strain	0.220
DRR006523	Root Summer glycyrrhizin low producing strain	0.094
DRR006524	Root Summer glycyrrhizin low producing strain	0.127
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.825
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.756

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	1.251
SRR2868004	Drought Stress (root)	1.958
SRR2967015	Control (root)	0.730

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	3.868
SRR9715740	Leaf	3.267
SRR9715741	Leaf	4.305
SRR9715739	Root	0.987
SRR9715742	Root	2.088
SRR9715743	Root	2.170

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.010
SRR8749028	MeJA induced 9h	0.039
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.167
SRR8749031	Uninduced	0.065
SRR8749032	Uninduced	0.044

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	1.902
SRR8400027	Control - Root	2.651