Gene detail information of Glyur002383s00031063 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G15545.1 | 7.00E-85 | |
| NR | XP_003546113.1 | 9.83E-177 | PREDICTED: uncharacterized protein At4g15545-like [Glycine max] |
| Swissprot | tr|Q93W28|Y4554_ARATH | 1.00E-131 | Uncharacterized protein At4g15545 |
| trEMBL | tr|I1MFA1|I1MFA1_SOYBN | 4.00E-177 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G10700.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02383 | 32909 | 37211 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.792 |
| SRR1783600 | control | 1.803 |
| SRR1783602 | moderate drought stress | 1.931 |
| SRR1811619 | moderate drought stress | 1.963 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.633 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.618 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.534 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.416 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.560 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.467 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 51.854 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 50.851 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.337 |
| SRR2868004 | Drought Stress (root) | 2.124 |
| SRR2967015 | Control (root) | 2.143 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 43.288 |
| SRR9715740 | Leaf | 82.250 |
| SRR9715741 | Leaf | 36.404 |
| SRR9715739 | Root | 2.677 |
| SRR9715742 | Root | 0.496 |
| SRR9715743 | Root | 0.510 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.170 |
| SRR8749028 | MeJA induced 9h | 0.340 |
| SRR8749029 | MeJA induced 9h | 0.801 |
| SRR8749030 | Uninduced | 0.462 |
| SRR8749031 | Uninduced | 0.244 |
| SRR8749032 | Uninduced | 0.513 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.393 |
| SRR8400027 | Control - Root | 5.629 |