Gene detail information of Glyur002383s00031056 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G18850.1 | 1.00E-07 | |
| NR | ACU19520.1 | 7.52E-20 | unknown [Glycine max] |
| trEMBL | tr|C6TCG8|C6TCG8_SOYBN | 3.00E-20 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU19520.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02383 | 1970 | 2310 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.059 |
| SRR1783600 | control | 6.208 |
| SRR1783602 | moderate drought stress | 5.628 |
| SRR1811619 | moderate drought stress | 7.305 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.220 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.436 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.715 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.426 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.140 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.798 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.007 |
| SRR2868004 | Drought Stress (root) | 15.464 |
| SRR2967015 | Control (root) | 12.144 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.115 |
| SRR9715740 | Leaf | 1.841 |
| SRR9715741 | Leaf | 2.194 |
| SRR9715739 | Root | 3.936 |
| SRR9715742 | Root | 0.653 |
| SRR9715743 | Root | 2.366 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.566 |
| SRR8749028 | MeJA induced 9h | 6.555 |
| SRR8749029 | MeJA induced 9h | 1.164 |
| SRR8749030 | Uninduced | 0.353 |
| SRR8749031 | Uninduced | 0.217 |
| SRR8749032 | Uninduced | 0.578 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.736 |
| SRR8400027 | Control - Root | 8.281 |