Gene detail information of Glyur002378s00036059.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G13180.1 | 3.00E-37 | NAC domain containing protein 83 |
| NR | NP_001239882.1 | 1.57E-79 | uncharacterized protein LOC100815663 [Glycine max] |
| Swissprot | tr|A0SPJ6|NAMB2_TRITD | 2.00E-31 | NAC transcription factor NAM-B2 |
| trEMBL | tr|C6THW3|C6THW3_SOYBN | 6.00E-80 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G23740.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02378 | 29891 | 32003 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | NAC |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002378s00036059.1 | PF02365.10 | NAM | 15 | 145 | 4.40E-32 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.583 |
| SRR1783600 | control | 4.549 |
| SRR1783602 | moderate drought stress | 5.784 |
| SRR1811619 | moderate drought stress | 5.734 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 16.474 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.317 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.430 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.446 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.392 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.843 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.400 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.230 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 27.706 |
| SRR2868004 | Drought Stress (root) | 43.870 |
| SRR2967015 | Control (root) | 38.986 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 76.011 |
| SRR9715740 | Leaf | 25.677 |
| SRR9715741 | Leaf | 87.027 |
| SRR9715739 | Root | 14.709 |
| SRR9715742 | Root | 60.623 |
| SRR9715743 | Root | 45.157 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.962 |
| SRR8749028 | MeJA induced 9h | 5.733 |
| SRR8749029 | MeJA induced 9h | 6.114 |
| SRR8749030 | Uninduced | 42.690 |
| SRR8749031 | Uninduced | 9.732 |
| SRR8749032 | Uninduced | 6.582 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 36.599 |
| SRR8400027 | Control - Root | 30.980 |