Gene detail information of Glyur002378s00036056 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_008355181.1 | 4.81E-08 | PREDICTED: vegetative cell wall protein gp1-like [Malus domestica] |
| trEMBL | tr|W9RKX9|W9RKX9_9ROSA | 8.00E-08 | Uncharacterized protein {ECO:0000313|EMBL:EXB80081.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02378 | 13509 | 19161 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.540 |
| SRR1783600 | control | 3.188 |
| SRR1783602 | moderate drought stress | 3.063 |
| SRR1811619 | moderate drought stress | 3.212 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.198 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.163 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 29.369 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 33.684 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.577 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.918 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.763 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.315 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.549 |
| SRR2868004 | Drought Stress (root) | 5.666 |
| SRR2967015 | Control (root) | 6.941 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.120 |
| SRR9715740 | Leaf | 2.797 |
| SRR9715741 | Leaf | 2.142 |
| SRR9715739 | Root | 0.859 |
| SRR9715742 | Root | 1.474 |
| SRR9715743 | Root | 0.526 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.435 |
| SRR8749028 | MeJA induced 9h | 5.567 |
| SRR8749029 | MeJA induced 9h | 2.344 |
| SRR8749030 | Uninduced | 3.223 |
| SRR8749031 | Uninduced | 1.364 |
| SRR8749032 | Uninduced | 2.359 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.103 |
| SRR8400027 | Control - Root | 6.544 |