Gene detail information of Glyur002366s00039480.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G23050.1 | 3.00E-36 | indole-3-acetic acid 7 |
| NR | KHN05057.1 | 1.03E-73 | Auxin-responsive protein IAA14 [Glycine soja] |
| Swissprot | tr|Q38832|IAA14_ARATH | 1.00E-52 | Auxin-responsive protein IAA14 |
| trEMBL | tr|K7N4T6|K7N4T6_SOYBN | 4.00E-67 | Auxin-induced protein {ECO:0000256|RuleBase:RU004549} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02366 | 19807 | 32451 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | AUX/IAA |
| EAR motif-containing Proteins | AUX/IAA |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002366s00039480.1 | PF02309.11 | AUX_IAA | 31 | 162 | 6.10E-15 |
| Glyur002366s00039480.1 | PF02309.11 | AUX_IAA | 171 | 216 | 7.70E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.936 |
| SRR1783600 | control | 7.925 |
| SRR1783602 | moderate drought stress | 7.938 |
| SRR1811619 | moderate drought stress | 8.256 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.553 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.543 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.285 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.406 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.132 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.134 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.007 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.943 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 60.582 |
| SRR2868004 | Drought Stress (root) | 57.950 |
| SRR2967015 | Control (root) | 44.978 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 30.453 |
| SRR9715740 | Leaf | 18.873 |
| SRR9715741 | Leaf | 23.047 |
| SRR9715739 | Root | 3.669 |
| SRR9715742 | Root | 11.348 |
| SRR9715743 | Root | 7.354 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 20.837 |
| SRR8749028 | MeJA induced 9h | 10.771 |
| SRR8749029 | MeJA induced 9h | 29.560 |
| SRR8749030 | Uninduced | 7.318 |
| SRR8749031 | Uninduced | 4.335 |
| SRR8749032 | Uninduced | 8.752 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.146 |
| SRR8400027 | Control - Root | 25.742 |